Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03717 ATGTTTTTGAAGGATAACAGTACTAACAACACCAACGGCTACCACCATCAACCACCACCTCCACCACCGGAAATGGTGCACAATCACATCAACAGAGACAGAGCCCGTCACGGCACTCGCCGCTCACGTGTTTCCACCTCTAATTCCCGTGTTAGGGTTTCCGATACCGAACAACCTCAACCACTACCACAGGCTAATCGATCTGCTTGCACCGATTACGACATGGCGTATTTTCATTCCTATGCTCACCTTGGGATTCACCAAGAGATGATCAAGGATCGTGTGCGGACTGATACTTATAGGGAAGCAATCATGCGGCATCAGAGTTTTATTGCTGGCAAAGTAGTAGTTGATGTTGGATGCGGTACAGGAATCCTTTCCATATTTTGTGCTCAGGCCGGTGCAAAGCGGGTGTATGCAGTTGATGCCAGTGACATTGCTCTGCAGGCAAATGAAGTTGTTAAAGCAAATAACCTTTCTGATGTTGTCATTGTATTGCATGGACGAGTTGAGGATGTTGAAATTAATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGAGCATGCTTGGGAGCGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGTGGTCTTATTCTTCCTTCGAGTGCATCGTTGTACATTGCTCCTGTTACACATACGGACAGATACAGTGACAGTGTTGACTTTTGGCGCAATGTTTATGGAATTGACATGTCTGCCATGCTATCATTAGCAAAACAATGTGCATTTGAGGAACCTTCTGTGGAGACAATAACCGGTGAAAATATTTTGACATGGCCACATATGGTTAAATATATTGATAGTTATTCCATTACCATCAATGAGTTAGAAACTGTAACATCAAAGTTTAAGTTCAACTCAATGATGCGAGCTCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAGTTCAATGTGCCAACGGTAGACTCATCAACATCAGTTATCGAGAATAATCAAGTGAACAGTAATTTGAGAAAAAAGCGAACAAATCCTAGTGAAGCACTGGTCCTATCCACTGCACCTGAGGACCCTCCAACACATTGGCAGCAGACGTTGATATACTTCTATGATCCTATTGACCTGGAACAAGATCAATTAATTGAAGGTTTAGTAACATTGACACAAAGCAAAGAAAATGCTCGATTTATGAATATTCACCTTGAATATACTTCAGGTAATCGATCGTATGTGAAAGAGTCTGTTATGAGATGA 1263 0.4212 MFLKDNSTNNTNGYHHQPPPPPPEMVHNHINRDRARHGTRRSRVSTSNSRVRVSDTEQPQPLPQANRSACTDYDMAYFHSYAHLGIHQEMIKDRVRTDTYREAIMRHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVVIVLHGRVEDVEINEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSSASLYIAPVTHTDRYSDSVDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENILTWPHMVKYIDSYSITINELETVTSKFKFNSMMRAPLHGFAFWFDVEFNVPTVDSSTSVIENNQVNSNLRKKRTNPSEALVLSTAPEDPPTHWQQTLIYFYDPIDLEQDQLIEGLVTLTQSKENARFMNIHLEYTSGNRSYVKESVMR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03717 420 FunFam Protein arginine N-methyltransferase 6 218 418 - -
Vifa3g03717 420 FunFam Protein arginine N-methyltransferase 6 70 216 - -
Vifa3g03717 420 Gene3D - 218 419 - -
Vifa3g03717 420 MobiDBLite consensus disorder prediction 1 66 - -
Vifa3g03717 420 Gene3D Vaccinia Virus protein VP39 71 216 IPR029063 -
Vifa3g03717 420 MobiDBLite consensus disorder prediction 44 66 - -
Vifa3g03717 420 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 74 403 IPR025799 GO:0016274|GO:0018216
Vifa3g03717 420 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 40 410 IPR025799 GO:0016274|GO:0018216
Vifa3g03717 420 CDD AdoMet_MTases 116 215 - -
Vifa3g03717 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 80 410 IPR029063 -
Vifa3g03717 420 Pfam Ribosomal protein L11 methyltransferase (PrmA) 112 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03717 Vifa-Chr3 1089975434 1089992236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03717 77 386 C2H2 Transcription Factor Family AT3G12270 39.077 1.23e-66 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03717 K11437 - gmx:100809171 652.514