LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa3g03680	ATGGATCCCAATAATCATTTTAACACTCAAAATTCTGCTAATTTTCCATTTAACCAAAATCCCAACAATTTTCCAAATCCCAACAATTATCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACATAATTTTGGTTTTCCACCAAATTTCAACCAGACATCCTCTGTTCCAAACTTTCAAACATATTATGGATCTATGCTGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGTGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGGCATGATAGTTTCTAATGAAGTCGGTCCGAATTCAGAGGATTCAACTCCTAAGAGCAGGAAAACTCAGCAACCAGCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTAAAATTGCGGAGTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCAGGAATTATATACATGTGGGAAGAATGTTAGATTCACTTTAATGGAAGAATGGCATGCTCTCCGTGATCAACCACGTTATGGTAGTCAAGTAGGAGGAAATATTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCGCGAGAGTGATGCATGTGGCTCAAACACTGTAGAATCCAGTGCTCGTCCTATAGGAAGGGAGGCAGCTAAAAAAAAGGGTAAAAAGAAAAGCAAGGAATATGCCTCGGAGGTGGTGGACAAAGAATGGGCTGAATACAAAGAATTCAAGACGAAAGAGCTTGAACGATTGGACAACATAGCCTTGATGCAACAGCAGGCTAACAATATAGCCTTGGAGAAGACTAAAACCAAGAAAATGAAGATGTATCTAAAGCTAACTTCCGAAGAGCATCTAGATGACCGGAAGAACCAGCTGTTGAAAAAGTTGGAGGCAGAACTGTTTGATAATTAA	1164	0.3995	MDPNNHFNTQNSANFPFNQNPNNFPNPNNYQNPNYYQNPNQFSNQHPQNIHNFGFPPNFNQTSSVPNFQTYYGSMLRNPSQTPPFNGYVTMVNANFPSGGVPEFPEFSTQLTIGGMIVSNEVGPNSEDSTPKSRKTQQPAWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGKIAEYCNEHCSFDPPRDGPACRNRFNYMNKVLGKWIGAYDGAKRMQGSGWSENDVLAKAQELYTCGKNVRFTLMEEWHALRDQPRYGSQVGGNIGSGSSGSKRSRESDACGSNTVESSARPIGREAAKKKGKKKSKEYASEVVDKEWAEYKEFKTKELERLDNIALMQQQANNIALEKTKTKKMKMYLKLTSEEHLDDRKNQLLKKLEAELFDN	387

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa3g03680	387	MobiDBLite	consensus disorder prediction	122	141	-	-
	Vifa3g03680	387	PANTHER	-	112	384	-	-
	Vifa3g03680	387	MobiDBLite	consensus disorder prediction	1	26	-	-
	Vifa3g03680	387	MobiDBLite	consensus disorder prediction	119	141	-	-
	Vifa3g03680	387	MobiDBLite	consensus disorder prediction	258	308	-	-
	Vifa3g03680	387	MobiDBLite	consensus disorder prediction	262	292	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa3g03680	Vifa-Chr3	1077706248	1077707411	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa3g03680	85	367	Glutathione S-transferase Gene Family	AT5G41240	27.124	1.11e-17	82.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa3g03680	-		-	tpra:123885584	487.648