Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03659 ATGGGCGTAGGAATTTCAGTCTTAATAGCCCTAAAAGCCACAACACTCTTACTCCTCTTCGCATACCTAAAAAACCTAGGCTTCTCAATTCTCTCCCTTCCCTTTCTCTACTCTTCCTTAATCTCCTTCCTCGTCTCACTCGCTTCACATCCATCCATCGATCTTCCGCTGCTCCTCGGCAAAACCTCCGACGGAACATTCCCAATTTCCTCCCTAATCATCTTCAGTCCTTACCTCTACTTCGTTAGACTCTTCTCCGCTGTTCGCAGACGCTGGAGCGGTGAACCGCCTTATACGGAGGTTTCTGATGGACTTTATGTTGGTGGTTGGCCTTCTTCTCCGGAGAAGTTGCCGCCCGGGGATCCTGCTGTTGTTGATTGTACCTGTGAGTTTCCGAGGTTGAAGGGGCTTACGGGTGGCTTGCCGTATAGGTGTCTTCCTACTTGGGATACCAGGTCCCCGAGGCCGGCTGATATTGAATTGGCTGTTAAATGGGCGTGTCGGAAAAGGGATCTTAATAGGCCTGTTTTTGTTCATTGTGCTTATGGTCATGGAAGAAGTGTTGCTGTTATGTGTGCACTGTTAGTAGCACTAGGTATCACAGAGGATTGGAAGACTGCTGAAAAGCTGATAAAGCAAAAACGGCCTTACATTCGCATGAATGCCCTCCATCGCAAGGCACTCGAAGAATGGTCCACAGACAGACTGTCTGTGCCAAAAAGTAAAAGATATGGGGGTGGATTAGTAGACTAA 753 0.4821 MGVGISVLIALKATTLLLLFAYLKNLGFSILSLPFLYSSLISFLVSLASHPSIDLPLLLGKTSDGTFPISSLIIFSPYLYFVRLFSAVRRRWSGEPPYTEVSDGLYVGGWPSSPEKLPPGDPAVVDCTCEFPRLKGLTGGLPYRCLPTWDTRSPRPADIELAVKWACRKRDLNRPVFVHCAYGHGRSVAVMCALLVALGITEDWKTAEKLIKQKRPYIRMNALHRKALEEWSTDRLSVPKSKRYGGGLVD 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03659 250 SMART dsp_5 97 234 IPR020422 GO:0006470|GO:0008138
Vifa3g03659 250 Gene3D Protein tyrosine phosphatase superfamily 98 236 IPR029021 -
Vifa3g03659 250 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 157 226 IPR000387 GO:0016311|GO:0016791
Vifa3g03659 250 PANTHER - 3 241 - -
Vifa3g03659 250 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 82 232 IPR029021 -
Vifa3g03659 250 CDD DSP_bac 94 233 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03659 141 242 Protein tyrosine phosphatase (PTP) family AT5G56610 31.731 3.25e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03659 - - aprc:113873203 419.468