Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03638 ATGGGAAAGAAAAATTTGAAACTATCTTCACTTTTCAAAACCAAACTCTCTTGTAACCATCATCCAAAGACTCTCTCATTTCGAATTGGTGGTGATGATGATATGTTCAAGACAGTTAACTCAGTGTTTTTCGACCAAACAGATAACCAAAGCAATATCGAAACACCGAAATCATGTTTCACAACAACCTCGTCTGATTCCGCGAGTTTCTCGACAGAATCAGACGAGTATTATTGCTACAACGACGGGGAGTTGTTGGAGACATTGGTACGAGGAGTTAAATCAGAAAGATCTTCTCATAGACTGTTTTTCGAAGCAGAAGACACGAGTTCCATCTTGGAAAAAGCGAAGGCGAACGGTTTTCCGTTTAAGGAAAGTGTGGTATTAGCTTTGGAGTCAGATGATCCTTATGAGGATTTCAAGAGATCAATGGAAGAGATGGTTGAGTCACATGGTGTGAAAGATTGGGAAGGTTTGGAGGAACTTTTGAGTTGGTATTTGAGGGTTAATGGGAAGAATAATCATGGGTTTATCGTTGGTGCTTTTGTTGATTTGTTGATTAGTTTAACTGGTTCTAAGGATTCTAGTAACTCTTGTTCAGAATTAACTTTCTATTCTTCTGCGGTTTCTTCTTTTGCTTCTTCACCAACTTTGTATTTATCTGAGGGACAGAATGAGATTACTGAGATTGAAGTTAATCATAATAATGTAACAGATTCTTAG 723 0.3776 MGKKNLKLSSLFKTKLSCNHHPKTLSFRIGGDDDMFKTVNSVFFDQTDNQSNIETPKSCFTTTSSDSASFSTESDEYYCYNDGELLETLVRGVKSERSSHRLFFEAEDTSSILEKAKANGFPFKESVVLALESDDPYEDFKRSMEEMVESHGVKDWEGLEELLSWYLRVNGKNNHGFIVGAFVDLLISLTGSKDSSNSCSELTFYSSAVSSFASSPTLYLSEGQNEITEIEVNHNNVTDS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03638 240 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 51 189 IPR038933 GO:0045892
Vifa3g03638 240 NCBIfam uncharacterized plant-specific domain TIGR01568 128 190 IPR006458 -
Vifa3g03638 240 ProSiteProfiles OVATE domain profile. 129 188 IPR006458 -
Vifa3g03638 240 Pfam Transcriptional repressor, ovate 133 189 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03638 Vifa-Chr3 1063178588 1063179310 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vifa3g03638 Ovate 4.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03638 - - mtr:25485550 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03282 5 1083470641 1083471474 Vifa3g03638 3 1063178588 1063179310 ECH
Vifa3g03638 3 1063178588 1063179310 Vifa3g03638 3 1063178588 1063179310 ECH