Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03633 ATGGCGGTTGAAGGTGTAAGCTCCATGAAGCTATCACAAAGAAACCTCGCAACCCAAGTCATCACAGGACGGTGGTTCGTGGTGTTCGCTTCCTTTCTAATCATGTCAGCCTCCGGAGCCACGTACATGTTCGGTCTATACTCCGGCGTGATAAAAAACTCCTTAGGCTACGACCAAACAACTCTCAACCTCCTTAGTTTCTTCAAAGACTTAGGAGGAAACCTTGGTGTCTTCTCCGGGTTAATCAACGAAATAACACCACCTTACGTTGTTCTTGCTATTGGCTCCCTTCTTAATTTCTTCGGCTACTTCATGATATGGTTAGCAGTATCCAAAAAAATACCAAAACCAAAAGTTTGGCAAATGTGTCTTTACATATGCGTAGGTGCGAATTCTCAGTCTTTTTCAAACACGGGTTCACTTGTTACATGTGTTAAGAATTTCCCTGAAACTCGCGGTGTTGTGTTGGGGATTCTAAAAGGCTATGTTGGTCTTAGTGGTGCTATCATCACACAGCTTTATAATGCTATTTACTTCAATGACCCAAAAGCTTTGATTCTTCTCATTGCTTGGCTTCCTGCTGCAATTTCTTTTCTTTTCCTTCGAACCATTCGGTACATGAAACCGGTTAAACAGAACAACGAACTTAATGTTTTTTATAAGTTTCTGTATATTTCACTTGGTCTTGCTAGTTTTTTGTTGGTTATGATTATACTACAGCAAAAAGTGTCGTTTAAACAAAGTGAATATATAGGAAGTGCTTCTGTTGTTCTTATTCTCTTGTTTCTGCCACTTGCTGTTGTTTTTGTTGAACAAAAGAAGATTCAAAAGGTTAAGGTTCCGTTTGTTGATCCATTTTCTGTTAAAATAGTAGCTGATCAAGGTGATAATATCTCACCACCACCGATGACGACGACAACGATGACGACGACCGAAGAAAAAGAAACTAGATGGTGGGAAAATATTTTCTCACCACCAAAAAAAGGTGAAGATTTCACAATACTTCAAGCACTTTTCAGCATAGATATGATCTTACTATTCCTCGCCGGAACATGCGGTGTTGGTGGAACCTTAACAGCCATAGACAACCTAGGACAAATAGGAACATCCCTTGGATATCCAAAAACAAGCATAAGCACATTTGTTTCATTGGTGAGTATATGGAACTACCTAGGTAGAGTTTTCTCAGGTTTTGTCTCGGAACATGTTTTAACAAAGTACAATTTCCCAAGACCACTCATGCTTACATTAACCATGTTTCTATCCTGTGTCGGTCATCTTTTGATAGCTTTTGATGTTAAGAATGGTCTTTATTTTGCTTCGGTGATCATTGGATTTTGCTTTGGTGCACAATGGCCATTGGTTTTTGCCATAATTTCGGAGTTGTTTGGGTTGAAATATTATTCAACTTTGTACAACTTTGGTGGGGTAGCTAGTCCTATTGGGTTGTATTTTCTTAATGTTAGGGTTACTGGTCATTTGTATGACAAAGAAGCTAAGAGACAGTTGTTTGAAAGTGGAGTTCCAAGAAATAAAGATCAGGAATTGAATTGTGTAGGGGCAAGTTGTTTTAAATTGTCTTTCATTATTATCACTGGAGCTACTTTGTTTGGTGCCATTATTTCTCTTATTTTGGTGGCTAGGACTATTAAATTTTATAAAGGGGATATATATAAGAGGTACCGGTCGGAAGCGGTGGAGGTTGGAGGAGATACGGCACAGTTGGCGGTGGTTCATAACGGTGGCGAGAGAGAACAAGAAGAAAAAACTCTTCGTTAG 1779 0.3918 MAVEGVSSMKLSQRNLATQVITGRWFVVFASFLIMSASGATYMFGLYSGVIKNSLGYDQTTLNLLSFFKDLGGNLGVFSGLINEITPPYVVLAIGSLLNFFGYFMIWLAVSKKIPKPKVWQMCLYICVGANSQSFSNTGSLVTCVKNFPETRGVVLGILKGYVGLSGAIITQLYNAIYFNDPKALILLIAWLPAAISFLFLRTIRYMKPVKQNNELNVFYKFLYISLGLASFLLVMIILQQKVSFKQSEYIGSASVVLILLFLPLAVVFVEQKKIQKVKVPFVDPFSVKIVADQGDNISPPPMTTTTMTTTEEKETRWWENIFSPPKKGEDFTILQALFSIDMILLFLAGTCGVGGTLTAIDNLGQIGTSLGYPKTSISTFVSLVSIWNYLGRVFSGFVSEHVLTKYNFPRPLMLTLTMFLSCVGHLLIAFDVKNGLYFASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGVASPIGLYFLNVRVTGHLYDKEAKRQLFESGVPRNKDQELNCVGASCFKLSFIIITGATLFGAIISLILVARTIKFYKGDIYKRYRSEAVEVGGDTAQLAVVHNGGEREQEEKTLR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03633 592 CDD MFS_Mch1p_like 23 539 - -
Vifa3g03633 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 559 - -
Vifa3g03633 592 Gene3D MFS general substrate transporter like domains 337 553 IPR036259 -
Vifa3g03633 592 Gene3D MFS general substrate transporter like domains 19 213 IPR036259 -
Vifa3g03633 592 Pfam Nodulin-like 24 269 IPR010658 -
Vifa3g03633 592 SUPERFAMILY MFS general substrate transporter 23 551 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03633 Vifa-Chr3 1060494993 1060496771 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03633 12 564 Nodulin-like Gene Family AT2G39210 65.957 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03633 - - gmx:100808975 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03633 3 1060494993 1060496771 Vifa3g03633 3 1060494993 1060496771 ECH