Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03631 ATGGCTTTCAAAATTAACTCCATAGGTGTTCATGGTTGGGGCGACACGAGGAGTCTCATCGTCCAATTCATAACTGGACGATGGTTCGTCGTGTTCGCCTCTTTTCTAATCATGGCTGCAGCCGGAGCTACGTATATGTTTGCGTTATACTCCGGCGACATAAAAGATGCACTTGGTTATGATCAAAGCACACTCAACCTCCTTAGTTTCTTCAAAGATTTTGGAGCCAACGTTGGTATTCTTGCTGGATTAGTCAACGAAATATATCCACCTTGGGTAGTTCTAACAATAGGTGCTATTCTGAATTTCTTTGGTTACTTCATGATTTGGTTATCAGTAACCAAAAAAATAGCAACACCAAAAGTTTGGCAAATGTGTCTTTACATTTGCATTGGTGCTAACTCTCAGTCTTTTGCAAACACCGGTTCACTTGTAACTTGTGTGAAGAACTTCCCCGAATCTCGCGGCGCTGTTTTGGGAATTCTTAAAGGCTATGTTGGTCTCAGTGGCGCCATCATAACTCAGCTTTATTATGCTTTTTATTATGATGACACAAAGTCTTTGATTTTGTTGATAGGCTGGCTTCCGGCCGCGGTGTCTTTCGCCTTTCTTCGAACCATTCGATACATGAAACCTGTTCGACAAGTTAAAGAGATTAAGGTTTTCTATAATTTCTTGTATATTTCACTTGGTCTTGCTGGTTTTTTGTTGGCAATGATTATCATAGAGAAGAAGACTAATTTCACGCAGAGTGAGTATGGTTTTAGTGCTGCAATGGTTATCTTCTTGCTTCTTCTCCCGCTTCTTGTTGTTTTTATCGAAGAGAACAAGATTTGGAAGAGTAAGAGGCTCGCTTTGGTTGATTCTTCACCGGTGAAAATAGTGACAGAAACTGAAAAAGTCAACAACGCTGTTCATTCAGTTTCAGCTTCAACTCCAAAGAAAGATCCAAGATGGTTTGAGGATGTGTTTAATCCACCAGCAAGAGGTGAGGATTACACAATACTTCAAGCACTTTTCAGCATTGACATGTTGATACTATTTGTGGCATGTATTTCTGGTGTTGGTGGAGCCTTGACAGCGATCGATAATCTTAATCAGATAGTTGTCTCACTTATTTTAGTGGCGAGAACAAGAAAGTTTTACAAAGGGGACATATACAAGAGGTATAGAGAAGAAGCTGAAATGGTGGAAGTAAAGAAAGAGGAAGAAGCCAAAGTTGGTCAACCACATGTGGTAACATCTTAG 1248 0.4014 MAFKINSIGVHGWGDTRSLIVQFITGRWFVVFASFLIMAAAGATYMFALYSGDIKDALGYDQSTLNLLSFFKDFGANVGILAGLVNEIYPPWVVLTIGAILNFFGYFMIWLSVTKKIATPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYYAFYYDDTKSLILLIGWLPAAVSFAFLRTIRYMKPVRQVKEIKVFYNFLYISLGLAGFLLAMIIIEKKTNFTQSEYGFSAAMVIFLLLLPLLVVFIEENKIWKSKRLALVDSSPVKIVTETEKVNNAVHSVSASTPKKDPRWFEDVFNPPARGEDYTILQALFSIDMLILFVACISGVGGALTAIDNLNQIVVSLILVARTRKFYKGDIYKRYREEAEMVEVKKEEEAKVGQPHVVTS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03631 415 SUPERFAMILY MFS general substrate transporter 27 273 IPR036259 -
Vifa3g03631 415 Pfam Nodulin-like 27 272 IPR010658 -
Vifa3g03631 415 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03631 Vifa-Chr3 1058652572 1058654335 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03631 14 372 Nodulin-like Gene Family AT2G39210 69.399 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03631 - - gmx:100776865 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03631 3 1058652572 1058654335 Vifa3g03631 3 1058652572 1058654335 ECH
Vifa5g03069 5 1013753986 1013755716 Vifa3g03631 3 1058652572 1058654335 ECH