Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03580 ATGAGACTTATACAAAAGCTAGCAAGCGTTTCATATCATGATTTTTCAGAGGTAGAACTTGCGCCAATGTTTTCAGAATTGACATTCAACACAGTCATGAGAATGATGTCAGGGAAACGATATTATGGTGATGACTGTGATGTGAGTGATGTTGAGGAAGCAAGGTTGTTTAGAGAGATAATGAAAGAGATTCTGAGTTTAGGAGGAGCAACCAACATTAGTGATTTTTTAGGGTTTTTAAGGTGGTTTGATTTTGATGGTTTGGAGAAGAGTCTTAAGAGGATAAGTAAGAGAGCAGATTCATTTTTACAAAGACTAATTAATGAACATAGATTTGAAAAGAGGACCACTAATACTATGTTAGATCATCTCTTAAAACAACAACAGTCACAACCTGAATATTACACAGACCAAATCATCAAAGGACTTATCATGGTTATGCTTCTTGCAGGAACTGACACATCATCTATAACTTTAGAATGGGCTATGACCAATTTATTAAATAATCCAAATATATTAAAGAAGGCAAAAGATGAGTTGGACACTCACGTTGGACAAGACCACTTAGTAAATGAACATGATATTTCAAAACTTTCTTATCTTCAAAATATTGTTTATGAGAGTCTCCGATTACATCCAGCTGCTCCACTATTATTGCCTCATTTTTCTTCAAAATATTTTACAATAGAAAAATACAATATCCCACAAAACACAATTTTAATGGTCAATGCATGGGCCATTCATAGAGATCCAAATTTGTGGATTGATCCTATATGTTTTAAGCCTGAGAGATTTGAGAAAGAAGGTGAGACAAATAAACTACTTTCATTTGGAATGGGAAGAAGGGCTTGTCCAGGAGAAAATTTGGCTCATCGCACAATGAGTGTAACTTTAGGTTTATTGATCCAGTGTTTTGAGTGGAAACGTATAGGTAAAGAAAAAATTGACATGGGCGAAAAAAAAGGAGTTACTTTGGAAAAAGAGATTTCCTTAAAAGCAATGTGCAAATTGCGTCATCCAATGAAGATTAAAAATGCTTTCTAA 1044 0.341 MRLIQKLASVSYHDFSEVELAPMFSELTFNTVMRMMSGKRYYGDDCDVSDVEEARLFREIMKEILSLGGATNISDFLGFLRWFDFDGLEKSLKRISKRADSFLQRLINEHRFEKRTTNTMLDHLLKQQQSQPEYYTDQIIKGLIMVMLLAGTDTSSITLEWAMTNLLNNPNILKKAKDELDTHVGQDHLVNEHDISKLSYLQNIVYESLRLHPAAPLLLPHFSSKYFTIEKYNIPQNTILMVNAWAIHRDPNLWIDPICFKPERFEKEGETNKLLSFGMGRRACPGENLAHRTMSVTLGLLIQCFEWKRIGKEKIDMGEKKGVTLEKEISLKAMCKLRHPMKIKNAF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03580 347 PRINTS E-class P450 group I signature 274 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 PRINTS E-class P450 group I signature 159 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 PRINTS E-class P450 group I signature 243 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 PRINTS E-class P450 group I signature 27 45 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 PRINTS E-class P450 group I signature 284 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 PRINTS E-class P450 group I signature 139 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 Gene3D Cytochrome P450 1 340 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 SUPERFAMILY Cytochrome P450 3 338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 Pfam Cytochrome P450 15 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 277 286 IPR017972 GO:0005506|GO:0016705
Vifa3g03580 347 PANTHER CYTOCHROME P450 82C3-RELATED 15 341 - -
Vifa3g03580 347 PRINTS P450 superfamily signature 275 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 PRINTS P450 superfamily signature 284 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 PRINTS P450 superfamily signature 203 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03580 347 PRINTS P450 superfamily signature 150 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03580 Vifa-Chr3 1032595622 1032596865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03580 2 338 Cytochrome P450 AT4G37330 54.896 5.62e-135 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03580 K13260 - gmx:100811727 501.13