Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03573 ATGAAAGAGATTCTGAGTTTAGGAGGAGCAACCAACATTAGTGATTTTTTAGGGTTTTTAAGGTGGTTTGATTTTGATGGTTTGGAGAAGAGTCTTAAGAGGATAAGTAAGAGAGCAGATTCATTTTTACAAAGACTAATTGATGAACATAGATTTGAAAAGAGGACCACTAATACTATGTTAGATCATCTCTTAAAACAACAACAGTCACAACCTGAATATTACACAGACCAAATCATCAAAGGACTTATCATGGTTATGCTTCTTGCAGGAACTGACACATCATCTATAACTTTAGAATGGGCTATGACCAATTTATTAAATAATCCAAATATATTAAAGAAGGCAAAAGATGAGTTGGACACTCACGTGGGACAAGACCACCTAGTAAATGAACATGATATTTCAAAACTTTCTTATCTTCAAAATATTGTTTATGAGAGTCTCCGATTACATCCAGCTGCTCCACTATTATTGCCTCATTTTTCTTCAAAAGATTTTACAATAGAAAAATATAATATCCCACAAAACACAATTTTAATGGTCAATGCATGGGCCATTCATAAAGATCCAAATTTGTGGATTGATCCTATATGTTTTAAGCCCGAGAGATTTGAGAAAGAAGGTGAGACAAATAAACTACTTTCATTTGGAATGGGAAGAAGGGCTTGTCCAGGAGAAAATTTGGCTCATCGCACAATGAGTGTAACTTTAGGTTTATTGATTCAGTGTTTTGAGTGGAAACGTATAGGTAAAGATAAAATTGACATGGGCGAAAAAAAAGGAGTTACTTTGGAAAAAGAGATTTCCTTAAAAGCAATGTGCAAATTGCGTCATCCAATGAAGATTGAAAATGCTTTCTAA 864 0.3368 MKEILSLGGATNISDFLGFLRWFDFDGLEKSLKRISKRADSFLQRLIDEHRFEKRTTNTMLDHLLKQQQSQPEYYTDQIIKGLIMVMLLAGTDTSSITLEWAMTNLLNNPNILKKAKDELDTHVGQDHLVNEHDISKLSYLQNIVYESLRLHPAAPLLLPHFSSKDFTIEKYNIPQNTILMVNAWAIHKDPNLWIDPICFKPERFEKEGETNKLLSFGMGRRACPGENLAHRTMSVTLGLLIQCFEWKRIGKDKIDMGEKKGVTLEKEISLKAMCKLRHPMKIENAF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03573 287 Gene3D Cytochrome P450 1 279 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 Pfam Cytochrome P450 15 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 SUPERFAMILY Cytochrome P450 3 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 PRINTS E-class P450 group I signature 99 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 PRINTS E-class P450 group I signature 224 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 PRINTS E-class P450 group I signature 142 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 PRINTS E-class P450 group I signature 183 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 PRINTS E-class P450 group I signature 214 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 PRINTS E-class P450 group I signature 79 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 217 226 IPR017972 GO:0005506|GO:0016705
Vifa3g03573 287 PRINTS P450 superfamily signature 90 107 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 PRINTS P450 superfamily signature 224 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 PRINTS P450 superfamily signature 215 224 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 PRINTS P450 superfamily signature 143 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03573 287 PANTHER CYTOCHROME P450 82C3-RELATED 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03573 Vifa-Chr3 1031514959 1031516022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03573 1 278 Cytochrome P450 AT4G37330 58.633 5.04e-120 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03573 K13260 - gmx:100811727 416.772