Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03544 ATGCTAATATACATTAATCATCTCTTTGAGTATGTATGTCTGATTAATGAAATGGTGTCAGCTAACAAGTGCAGTTTGGAGATAGATTACAAGAAATATATCTATGTCTATCCCAACATTGCCATTTGGCTGGCTGATGCACCTCATTCTGTTCTAGAAGTGATGGAAAATGTTGCTAAAAGTGTTGTCTTTCAATTACATCCAAATTACAAACATATATATCAAAAGATTTGTGTTCTCCTCTCCTCTTTTCCATTGGATGAAAAATTAATCATTGCCTTTTATGTGTATTGTAGCATGATTGACAAATATTATAACTTTTTGGATTTCTGTGACTAA 339 0.3186 MLIYINHLFEYVCLINEMVSANKCSLEIDYKKYIYVYPNIAIWLADAPHSVLEVMENVAKSVVFQLHPNYKHIYQKICVLLSSFPLDEKLIIAFYVYCSMIDKYYNFLDFCD 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03544 112 Pfam MCM N-terminal domain 9 68 IPR027925 -
Vifa3g03544 112 Gene3D - 4 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03544 Vifa-Chr3 1017870799 1017871217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03544 10 90 Core DNA Replication Machinery Family AT1G44900 66.667 1.07e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03544 K02540 - psom:113271481 130.183