Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03537 ATGCCTAATGGATCACTTGAGAAGTTCATATATGAAAACAAAGATCCATTAAAGTTAAATCTTCAACTGAGTTGCAAAACTATCTACAATATTGCAGTTGGAGTAGCCCGCGGATTAGAGTATTTGCATAAGGGTTGCAATACTAAAATCTTACATTTTGATATAAAGCCTCATAATATATTGTTAGATGATGATTTTTGTCCTAAGGTTTCGGATTTCGGACTTGCAAAAGTATGTGCAAGAAAAGAAAGTATCATATCTTTATTGGGTACCAGAGGTACAGCAGGATACATTGCTCCTGAAGTGTTCTCTAGAAATTTCGGCGGTGTCTCTCACAAATCTGATGTATATAGCTATGGAATGATGGTTTTAGAAATGGTTGGGGGAAAACAGAATAACAATGTTGTTGAAGTTGAACGGTCGAGTGAAATTTATTTTCCACACTGGGTTTACAAGCGTCTTGAACTGAATCAAGAGCCTAGATTGCGGAGCATTAAAAATGAATTTGATAAACAAATTGTGCAAAAGATGATTATAGTAAGTTTATGGTGTATCCAGACGGATCCATCACATAGGCCTGAAATGAGTAAAGTGGTAGATATGATGGAAGGTAGCTTGGAATCTTTGCAAATACCACCAAAACCTTGTCTCTTTTCACCTCCCAGGTCTCCCTCAAGATCATCAGATTATAACACTCACGCATCTCAAGATTTTTATACTTCAGGTTCACTTCACTACACTGATTCTGAACCTTTAATCATTACGCCTTAG 771 0.3658 MPNGSLEKFIYENKDPLKLNLQLSCKTIYNIAVGVARGLEYLHKGCNTKILHFDIKPHNILLDDDFCPKVSDFGLAKVCARKESIISLLGTRGTAGYIAPEVFSRNFGGVSHKSDVYSYGMMVLEMVGGKQNNNVVEVERSSEIYFPHWVYKRLELNQEPRLRSIKNEFDKQIVQKMIIVSLWCIQTDPSHRPEMSKVVDMMEGSLESLQIPPKPCLFSPPRSPSRSSDYNTHASQDFYTSGSLHYTDSEPLIITP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03537 256 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa3g03537 256 MobiDBLite consensus disorder prediction 210 234 - -
Vifa3g03537 256 Gene3D Transferase(Phosphotransferase) domain 1 1 211 - -
Vifa3g03537 256 SUPERFAMILY Protein kinase-like (PK-like) 1 240 IPR011009 -
Vifa3g03537 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Vifa3g03537 256 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 226 IPR045874 GO:0004672
Vifa3g03537 256 SMART serkin_6 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa3g03537 256 FunFam PR5-like receptor kinase 1 214 - -
Vifa3g03537 256 Pfam Protein kinase domain 19 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03537 Vifa-Chr3 1017381271 1017382141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03537 1 241 Receptor kinase-like Gene Family AT4G18250 57.317 4.28e-89 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vifa3g03537 Pkinase 5.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03537 - - psat:127098536 489.189