Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03473 ATGGGTTTACAAAACCAACTAAACGACGTGTCGTCGGACTCAATCCCGCTCCTCGTGTTGATGCACATCGCCACCGTTGTCAACTACATCCGCACGATGCTCCTGACTCTCTTCCAATCCATCGGCCTCTCGCGTCTCCAAACCGATCAGATCGTCGACGACCACTTCCTCGCCGCCGTCGGATCAGGTCTAGCCGGAATCATCCTCCTCTCCGATCAACTATCTCTCAACAACCAACACTTTTACACATACGAAGACGCCGCTTCAGCCGACAACCACCGCTGCGTATTTTGCCAATCAACCTTCGAAAACGGCGACCACGTTCGGAAGCTTCCCTGCCGCCACGTCTTCCACCGCCACTGTCTCAACGGGTGGTTTCATCGGTACAACTTCAATTGTCCGTTGTGCCGGTCTTCGCTTGTCTCCGACGAGCGCGTGGCGCTCACCGAACGCCGTGTCGGTAGCCAACTCATCTCGTGGTTCACTCTTCGCTGA 495 0.5556 MGLQNQLNDVSSDSIPLLVLMHIATVVNYIRTMLLTLFQSIGLSRLQTDQIVDDHFLAAVGSGLAGIILLSDQLSLNNQHFYTYEDAASADNHRCVFCQSTFENGDHVRKLPCRHVFHRHCLNGWFHRYNFNCPLCRSSLVSDERVALTERRVGSQLISWFTLR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03473 164 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Vifa3g03473 164 Pfam Ring finger domain 94 137 IPR001841 -
Vifa3g03473 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 142 IPR013083 -
Vifa3g03473 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 74 147 - -
Vifa3g03473 164 SMART ring_2 95 136 IPR001841 -
Vifa3g03473 164 SUPERFAMILY RING/U-box 76 143 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03473 1 163 C3H Transcription Factor Family AT1G15100 50.920 1.74e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03473 K16282 - gmx:100803789 238.81