Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03430 ATGGCTCATATTCGTGAACTGGTGGAACTTCTGTTAAGGCATCCACAATTATTCAAGTCAATTGGTGTTAAGCCACCAAAAGGTATTTTGTTGTATGGACCCTCTAGATATGGTAAGACTTTAATTGCACGAGCTGTTGCAAATGAAACAAGTGCCTTCTTTTTCTACATCAATGGTCCTGAGATCATGTCAAAATTGGCTGGTGAGAGTGAAAGTAGTCTTAGGAAGGATTTTAAAGAAGCTGAGAAGAATGCACCCTCAATCATCTTCATTGATGAGATTGACTCTGTTGTACCCCAAAATTTGCCCTCCCATTTCTCATTAATCTCTCCTCACAAAACTCTTGAAGCTCAAGATCCAGTTAGGGTTTCATCTGCTCAAGACTCCTCCTTGCACTGCTAA 402 0.403 MAHIRELVELLLRHPQLFKSIGVKPPKGILLYGPSRYGKTLIARAVANETSAFFFYINGPEIMSKLAGESESSLRKDFKEAEKNAPSIIFIDEIDSVVPQNLPSHFSLISPHKTLEAQDPVRVSSAQDSSLHC 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03430 133 FunFam Cell division control protein 48 homolog E 1 63 - -
Vifa3g03430 133 Pfam ATPase family associated with various cellular activities (AAA) 29 101 IPR003959 GO:0005524|GO:0016887
Vifa3g03430 133 Gene3D - 3 101 IPR027417 -
Vifa3g03430 133 PANTHER AAA-FAMILY ATPASE 4 101 - -
Vifa3g03430 133 SMART AAA_5 25 131 IPR003593 GO:0016887
Vifa3g03430 133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 100 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03430 Vifa-Chr3 984799588 984799989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03430 21 99 Calmodulin-binding Proteins AT3G56690 43.038 5.49e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03430 K13525 - aip:107621123 173.711