Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03389 ATGTCTACGTTTTCAATCGGAACACACTTGTCCATGTTCCAACATTTGGGGAATTCAAGGCTTTCATCACTTCAATCTTCGCCCACACAATCCAAACCCTTCTTCACCACTTCTTCTTCTTGTAGAACCAGATTCGGAGTTCCCAATCCCAAGTTACTCCGTAATAATGTATTGGCACGCGCTGAAGATAAAGCCAGAGATTCTAACTCTTCATTTCAGCCTCCACAAAGTTCACAACAGCAGTACCAGGATTTGACATCAGAATCTGGAACTTGTGATCCCTTATGTTCAGTTGATGAAACAAGCTCGCAAGATTTCGAAGACAACTACCAGCCCAAGACTGATTTGCTCAAAGCAGTTGCGATATTTGCGGCGGCTGCAACTGGGACAGTAGCAATTAACCATTCTTGGGTGGCTGCTAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATCATATTTGAAGAGTCTCTAGCTTTCAACAAAAGCGGAGTAGGGCTAATAATGGCTGTAAGCTTATGGGTGATACGGAGTATTGGGGCTCCATCAACTGAAATAGCTGTTTCGGAGCTATCACACGCATCTGCTGAAGTCAGTGAAATAGTGTTCTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTTAAGATAGTTACTGACAATATAAAAACCCGAAACCCACGCCTTCTCCTTTGGGTGGTTGGATTTATTACATTTTTTCTCAGTTCAGTTCTGGACAACCTTACATCAACCATAGTCATGGTTTCTCTGTTGCGGAAATTAGTACCTCCATCAGAGTATCGAAAGATTCTTGGAGCTGTTGTTGTAATAGCCGCAAACGCCGGTGGTGCATGGACTCCTATTGGTGATGTTACTACTACTATGCTGTGGATACATGGCCAGATAACTACAGTGCAAACAATGAAGGGTTTGTTTTTGCCTTCAGCCATTTCTCTAGCCGTGCCACTGGCCCTAATGTCATTGACAAGTGAAGCTAATGAGAAGGGGCCGGAATCTCCCACTCTCCTGTCATCTGAACAGATGGCTCCTCGAGGAAAGCTTGTTTTCTCAGTGGGTTTAGGTGCTTTGATTTTTGTCCCCGTGTTCAAGGCCGTCACAGGTTTGCCTCCGTACATGGGGATGCTGCTTGGACTCGGCGTGCTTTGGATCCTTACCGATGCTATTCATTATGGTGAATCTGAAAAGAGACAGAAGCTTAAAGTCCCACAGGCTCTATCAAGGATCGACACTCAAGGAGCGCTATTCTTCCTTGGAATTCTATTATCTGTTAGCAGTCTGGAGGCAGCCGGAGTTCTCCGGGAAATAGCAAATTACCTTGACGCTCATGTCCAAAATAGTGAACTAATCGCAAGTGCTATTGGAGTCATATCTGCAATCATAGACAATGTTCCATTGGTTGCTGCAACAATGGGAATGTACGACGTCACTTCTTTCCCTCAAGATTCTGAGTTCTGGCAATTGGTTGCATTTTGTGCTGGTACCGGTGGATCCATGTTAGTTATTGGCTCAGCTGCTGGAGTCGCATTCATGGGGATGGAAAAAGTGGATTTCTTTTGGTACTTTAAAAAGGTTAGTGGATTTGCTTTTGCAGGCTATGCTGCCGGGATTGCTACATATCTAGCCCTTCATAACCTCAACATCTCCTTACCAACAACTCTAGCGGAGGTTCCTTTTCTCTCTGGTTCTTAA 1743 0.4429 MSTFSIGTHLSMFQHLGNSRLSSLQSSPTQSKPFFTTSSSCRTRFGVPNPKLLRNNVLARAEDKARDSNSSFQPPQSSQQQYQDLTSESGTCDPLCSVDETSSQDFEDNYQPKTDLLKAVAIFAAAATGTVAINHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLIMAVSLWVIRSIGAPSTEIAVSELSHASAEVSEIVFFLLGAMTIVEIVDAHQGFKIVTDNIKTRNPRLLLWVVGFITFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQITTVQTMKGLFLPSAISLAVPLALMSLTSEANEKGPESPTLLSSEQMAPRGKLVFSVGLGALIFVPVFKAVTGLPPYMGMLLGLGVLWILTDAIHYGESEKRQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGVLREIANYLDAHVQNSELIASAIGVISAIIDNVPLVAATMGMYDVTSFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYFKKVSGFAFAGYAAGIATYLALHNLNISLPTTLAEVPFLSGS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03389 580 MobiDBLite consensus disorder prediction 68 91 - -
Vifa3g03389 580 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 54 580 IPR045016 GO:0006814|GO:0015297
Vifa3g03389 580 NCBIfam sodium:proton antiporter NhaD 170 400 - -
Vifa3g03389 580 MobiDBLite consensus disorder prediction 63 91 - -
Vifa3g03389 580 Pfam Citrate transporter 155 511 IPR004680 GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03389 1 580 Antiporters AT3G19490 76.207 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03389 - - gmx:100779521 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03389 3 971922995 971926846 Vifa3g03389 3 971922995 971926846 ECH