Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03360 ATGCTCCAACGAGAGAAGTGGTTTAATCTTCTTCCACCAGATTCATTATCAATTCGCTCTTCATTTTCCACTCGTGGTGCTTACGGAATCGTTTGTTTGATGTTAAATACGAAAACGAGTGAATTGGTTGTTGTTAAGAATATATCAAATTCTTTTGATAATGGCATGGATGTGAAGCGTACTCTATGTGATATTAAGCTTCTTAAGCATTTAGATCATGAAAATAAAGAAGAAGTGGAAATGGTTCAACATGAAGATCGAAGAGTCTTAACAAATACTTATGAAGATCTAAACATTTTGTTGTCAAGTTGTTCCTTCTTCTTAGAATAA 330 0.3333 MLQREKWFNLLPPDSLSIRSSFSTRGAYGIVCLMLNTKTSELVVVKNISNSFDNGMDVKRTLCDIKLLKHLDHENKEEVEMVQHEDRRVLTNTYEDLNILLSSCSFFLE 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03360 109 Gene3D Phosphorylase Kinase; domain 1 15 102 - -
Vifa3g03360 109 SUPERFAMILY Protein kinase-like (PK-like) 25 75 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03360 Vifa-Chr3 963147965 963148808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03360 25 94 MAP Kinase Gene Family AT3G45640 56.338 2.63e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03360 K20536 - dcr:108218772 83.9593