Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03321 ATGACGAGCGCATCGGAACTATTCCACAACAGAAGACACCGATTCGCACGAAATGATCTCGATTCATCTTTCCACTCTTCCCCTTCTCCAGACTTCCATAACCACCGCTTTCACGACTCCGACGAGGATGACTCTCTCCGTATCCGCCGCCACTACCACGTCCGCCGCGTCCGTCACCCGGACCGTGCATCTGATAGATTTGATGTGAGGTATCGTCGCTCTCTGTTTCATGATAACTTTGATTCTGGACAAAGTGTGAGAGGTACTCCGAGTGTGAATGGCAGTAACAGATTACCTGTAGGTGTGAGACTTGCGCGAGAAAGACTCCTTCAGAGGTTGAGAGGAGAGCCTGTAGATAGAAACAGGCAATATAATAGAGATCCAACTGATGAGGAGGATCAAGAAAGTGAGTTATCAAGTGAAATTCCAACTGAGGACTCTTTAGTTACTGACTTGACTTCTCAAATGGCAAGGTTCCAGTTCTTGCAAGAAACATCCACAAAGCCTCCTGGACTCACTCAGGAGGCCCTGGACTGTTTGCATCATGAAGTTTTTAGCAGCAGCAATACGGAATCAGAATCCAGGATACTGCAAGATTGTGGGATATGCTTGGAATCTTTCACGGTTGGAGATAAACTAATCCATTTGCAATGTGGACATAAATTTCACTCTGCTTGTTTGGATCCTTGGATTCGCAGTTGTGGAGACTGCCCATACTGTCGCAGATGCATAGTTGTAAGTAGTCAATTTCCAAAGAATGATGCTGTGTAG 771 0.4617 MTSASELFHNRRHRFARNDLDSSFHSSPSPDFHNHRFHDSDEDDSLRIRRHYHVRRVRHPDRASDRFDVRYRRSLFHDNFDSGQSVRGTPSVNGSNRLPVGVRLARERLLQRLRGEPVDRNRQYNRDPTDEEDQESELSSEIPTEDSLVTDLTSQMARFQFLQETSTKPPGLTQEALDCLHHEVFSSSNTESESRILQDCGICLESFTVGDKLIHLQCGHKFHSACLDPWIRSCGDCPYCRRCIVVSSQFPKNDAV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03321 256 SMART ring_2 200 240 IPR001841 -
Vifa3g03321 256 MobiDBLite consensus disorder prediction 79 99 - -
Vifa3g03321 256 MobiDBLite consensus disorder prediction 19 40 - -
Vifa3g03321 256 ProSiteProfiles Zinc finger RING-type profile. 200 241 IPR001841 -
Vifa3g03321 256 Pfam Ring finger domain 199 241 IPR001841 -
Vifa3g03321 256 SUPERFAMILY RING/U-box 199 247 - -
Vifa3g03321 256 PANTHER SI:CH211-59O9.10 53 247 - -
Vifa3g03321 256 MobiDBLite consensus disorder prediction 79 96 - -
Vifa3g03321 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 157 245 IPR013083 -
Vifa3g03321 256 MobiDBLite consensus disorder prediction 113 145 - -
Vifa3g03321 256 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03321 Vifa-Chr3 953708524 953710832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03321 1 245 C3H Transcription Factor Family AT1G49850 42.692 5.42e-43 145