Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03315 ATGACCCAAAGAAAACAAAACAGAAAACCTAATTTCGTTCTCGGTATAAATAGTATTTGCAGATTTGAGAACTCTTTCACTTTCGCAGAAATCTACAGCAGCGGCGGCGTTTGGTCTCACCGGCGAGAATCAAGCAAAAAGCAATCAGCCATGGGACACAGCAACGTTTGGAATTCTCACCCCAAGACCTACGGTCCTGGTTCACGCACTTGCCGTGTGTGTGGGAATTCACATGGATTGATTAGGAAGTATGGACTCATGTGCTGTAGGCAGTGCTTCCATAGCAATGCCAAGGAAATTGGTTTCATCAAGTACCGTTGA 321 0.4517 MTQRKQNRKPNFVLGINSICRFENSFTFAEIYSSGGVWSHRRESSKKQSAMGHSNVWNSHPKTYGPGSRTCRVCGNSHGLIRKYGLMCCRQCFHSNAKEIGFIKYR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03315 106 PANTHER 40S RIBOSOMAL PROTEIN S29 51 106 IPR039744 GO:0003735|GO:0008270
Vifa3g03315 106 FunFam 40S ribosomal protein S29 51 106 - -
Vifa3g03315 106 Gene3D 30s Ribosomal Protein S14; Chain N 51 106 IPR043140 -
Vifa3g03315 106 Pfam Ribosomal protein S14p/S29e 57 106 IPR001209 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03315 51 106 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.857 1.55e-34 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03315 K02980 - lsv:111921360 130.954