Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03273 ATGAGAAACGAAAGGGTAGAAAAGGTAGGAAAACGAGAGATAAGTAGGAAAGGAAGTAAAGCAAGAAGATGGCTGATGATGGGCAGTGAGGGGCAGAGACATACGGTGGAAGCCGGGAAGGCGACGATAATGCAGCGGACCGGGCTGACCGCTAGGGACCTTAGGATTCTTGATCCTATGTTGTCATACCCTTCAACTATTATGGCTCGTGACAAAGCAATGGTCTTAAACTTGGAACAAATAAAGGCTATTGTTACTGCACATGAGGTTCTTTTGCTCAATTCTAGAGACCCCTCTGTTGTTCCTTTTGTTGAACAACTTCATGCAACAATTCTTCATCACCACACTGCTATTATTCATCATTCTCGAGATGATCAAGAAAAGAAGGATGAGGATGAAATAAAGCAAGTTAACAACAATAAGAAGATTATTCCATTTGAGTTTGTGGTGTTGGAGGCATGTCTTGAAGATGTTATAAGTTCCTTAGAAAATGAGGCCAATATATTGGAACTTGAGGCTTATCCTGCCCTAGATAAGCTAACCTCAAAGATTAGTACTCTTAATTTGGAACGTGTTCGCCATGTTAAAAGTCGATTAGTTGCCTTAACTGCTCGTGTTCAAAGGGTTAGAACTTACTTTCCTATTATCAATTTGTCATTTAACTTTATATTAATATCAAATTTCCAATTCATTCCCTTTGATAATTAG 708 0.3898 MRNERVEKVGKREISRKGSKARRWLMMGSEGQRHTVEAGKATIMQRTGLTARDLRILDPMLSYPSTIMARDKAMVLNLEQIKAIVTAHEVLLLNSRDPSVVPFVEQLHATILHHHTAIIHHSRDDQEKKDEDEIKQVNNNKKIIPFEFVVLEACLEDVISSLENEANILELEAYPALDKLTSKISTLNLERVRHVKSRLVALTARVQRVRTYFPIINLSFNFILISNFQFIPFDN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03273 235 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 9 211 IPR039204 -
Vifa3g03273 235 Gene3D Magnesium transport protein CorA, transmembrane region 102 213 - -
Vifa3g03273 235 FunFam Magnesium transporter MRS2-1 12 95 - -
Vifa3g03273 235 Coils Coil 152 172 - -
Vifa3g03273 235 Gene3D - 7 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03273 Vifa-Chr3 938030488 938033403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03273 24 210 MRS2 Gene Family AT3G19640 56.075 4.90e-72 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03273 - - ccaj:109817554 228.409