Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03215 ATGGCTTCTTCAACCAAAGAGATATCCAGAGACCTTCCACCTCTTCTCCGAGTATACAAAGATGGAACAGTCGAACGTTTCTTAGGCTCTCCAATCATACCACCAATCCCTCTCGATCCACAAACAGGTGTTTCATCAAAAGACATAACCATCTCACGAAACCCACTAATCTCAGCTCGTATCCATCTCCCAAAACTCACCAATCCAACACAAAAGCTTCCAGTCTTAGTTTACTATCATGGTGGTGCTTTTTGTCTTGAATCCGCTTTCTCTTTCCTCCACCAACGTTACCTCAACATTATAGCTTCACAATCAAACGTTCTTGTTGTTTCTGTCGAATATAGACTTGCACCAGAACACCCTCTTCCTGCTGCATATGATGATGGTTGGTTTTCTCTCAAATGGGTCACTTCACATTCCATCAACAACAACATAGCCACAGCTGAACCGTGGCTAATCAAACACGGTGATTTCGATAGATTTTACATCGGTGGTGACACGTCCGGTGCAAATATTGCACACAATTTACTTCTACGTGTTGGAAGCGGTGTAGAATCTTTACCTGGTGATGTGAAAATCAAAGGAGCAATACTAGCTTTTCCTTTGTTTTGGAGTTCGAAACCGGTTTTGTCAGAAAACATTGAAGGACATGAAGAGAGTTCACCAATGAAGGTTTGGAATTTTGTGTATCCTGATGCTGTTAATGGAATTGATAATGCTTTGATTAATCCTTTGGCTTCTGAGGCTCTTAGTTTGGACACGATTGGTTGTCCTAAGATGTTGGTTTTTGTTGCGGGGAATGATGATTTGAGAGACAGAGGGATTTGGTACTATGATGCGGTTAAGGAAAGTGGTTGGAATGGTGATGTTGAACTTGTTCATGTTGAAGGTGAAGAACATTGTTTTCAGATTTATCATCCTGAGACTAAGAATTCTGTCGATATGGTGAATCGTATTGCTTCTTTTCTTGTTTGA 975 0.4092 MASSTKEISRDLPPLLRVYKDGTVERFLGSPIIPPIPLDPQTGVSSKDITISRNPLISARIHLPKLTNPTQKLPVLVYYHGGAFCLESAFSFLHQRYLNIIASQSNVLVVSVEYRLAPEHPLPAAYDDGWFSLKWVTSHSINNNIATAEPWLIKHGDFDRFYIGGDTSGANIAHNLLLRVGSGVESLPGDVKIKGAILAFPLFWSSKPVLSENIEGHEESSPMKVWNFVYPDAVNGIDNALINPLASEALSLDTIGCPKMLVFVAGNDDLRDRGIWYYDAVKESGWNGDVELVHVEGEEHCFQIYHPETKNSVDMVNRIASFLV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03215 324 PANTHER ARYLACETAMIDE DEACETYLASE 12 307 - -
Vifa3g03215 324 Pfam alpha/beta hydrolase fold 76 303 IPR013094 GO:0016787
Vifa3g03215 324 Gene3D alpha/beta hydrolase 12 324 IPR029058 -
Vifa3g03215 324 SUPERFAMILY alpha/beta-Hydrolases 34 323 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03215 Vifa-Chr3 923537790 923538764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03215 7 323 Carbohydrate Esterase AT3G48700 39.450 6.32e-77 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03215 - K13258 gmx:100785409 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03988 1 613109680 613111119 Vifa3g03215 3 923537790 923538764 PCT