Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03132 ATGGCTTTTCTTCTATTTGTCTTAACATGTGCCATCATCTATGTTTTTCTTCGTTCATTCTTTGCAATGATCACAAAACCAAAATATAATCTTCCACCAGGACCTTCCCCTCTTCCCATCATAGGGAACCTCCTTGAATTAGGAGACAAGCCTCACAAATCATTGGCAAAACTTGCTGAAATTTATGGCCCAATAATGAGTCTCAAGTTTGGCCAAATAATCACTGTTGTTGCATCCTCAGCAGATATGGCAAAAGAGGTGCTTCTCACCAATGACCAGTTCTTGTCAAACAGAACCATTCCACAATCCGTGTCGGTTCTCGACCACGAGCATTATAGTCTTGCTTTCATACCAGTTTCACCTCTTTGGAAGGAGTTAAGAAAAATATGCAACACAGAGTTGTTTTCTCACAAGACTCTTGATGCTAGCCAAGACGTGAGGCGCAAGATAATACAACAGATTCTCAACGATATCGGTGAAAGCAGTCAAATTGGCGAGGCGATAGATATTGGAACAGTAGCGTTCAAGACAACCTTAAATATGTTGTCAAACACTATTTTCTCTGTGGATTTGATCCAGTCTAAAGGCGAAGCGGGAGAGTTTAAGGACTTGGTGACTGATATTACAAAACTCGTTGGCACACCGAATGTAGCGGATTTTTTTCCTGTATTGAAGAGGATCGACCCACAAGGCGTAAAAAAGAGACAGACAAAGAATGTTAGGAAAGTGTTGGACATTTTTGAAGACTTGGTTAATCAACGTTTGAAGATGAGGGAAACCACATGTGTATACACCAACAAAGACATGTTAGATGCCATGCTAAACATTTCTGAGGGAAATGAGTTTATGGACAATAACATGATCCAACATCTAGCACATGATCTATTTGTCGCGGCAACAGATACAACAACATCTACCCTCGAATGGGCGATGACAGAGCTTATCCACAACCCGAAAGTTATGCTGAAGGCTAAAATAGAGTTAGAGAAAATGATTGGTCGTGGTGTCCCGCTTGAGGAATCAAATATTTCTAACCTCCCATACTTACAGGCAATAATAAAGGAGACGTTTCGGTTGCACCCTCCCGTGCCGCTCTTACTGCCACGAAAAGCTGAGAGGAATGTTGACATAGGTGGCTACATTATCCCGAAGGACGCACAAGTAAAGATTCTTGGGGTCTGA 1182 0.4171 MAFLLFVLTCAIIYVFLRSFFAMITKPKYNLPPGPSPLPIIGNLLELGDKPHKSLAKLAEIYGPIMSLKFGQIITVVASSADMAKEVLLTNDQFLSNRTIPQSVSVLDHEHYSLAFIPVSPLWKELRKICNTELFSHKTLDASQDVRRKIIQQILNDIGESSQIGEAIDIGTVAFKTTLNMLSNTIFSVDLIQSKGEAGEFKDLVTDITKLVGTPNVADFFPVLKRIDPQGVKKRQTKNVRKVLDIFEDLVNQRLKMRETTCVYTNKDMLDAMLNISEGNEFMDNNMIQHLAHDLFVAATDTTTSTLEWAMTELIHNPKVMLKAKIELEKMIGRGVPLEESNISNLPYLQAIIKETFRLHPPVPLLLPRKAERNVDIGGYIIPKDAQVKILGV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03132 393 Pfam Cytochrome P450 32 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03132 393 SUPERFAMILY Cytochrome P450 32 390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03132 393 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 389 - -
Vifa3g03132 393 Gene3D Cytochrome P450 23 391 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03132 393 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03132 393 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03132 393 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03132 393 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03132 393 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03132 393 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g03132 393 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03132 Vifa-Chr3 902114097 902115435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03132 5 388 Cytochrome P450 AT2G45550 43.401 7.11e-109 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03132 - - gmx:100807367 566.229