Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03079 ATGGAAGAAATTGCAAGTTTTTCTAAATCTGATGCTAAAGAAGAGTTTGTTGATGTTGATTTAACACAAATCTCTCTTAGACCCATTGTTCTTTCTGATCTTGATGATCTTATGTTGTGGACTAGTGATGAAAAAGTTGCCAAGTATTGCACTTGGGAGCCTTATACCAACAAAGAATATGGCATCAACTTCATCCAAAACATAGCAAGCAAATCTCTATGGTTCAGAGCAATTTGCCTTCAAGATCGCGCAATCGGGTGTATCGATTTCAAGTCATGTTCGGGTAGATGCTTGGAGAAATCTGCTGAACTTGGTTATGCTCTGAGTTCTAAGTATTGGGGCAAAGGAATTGCAACACTGGTTATGAAACAAGTGATTGAAGTGGCATTTAAGGAGTTTTCATACTTGGAGAGGCTTGAATCTCGCGTTGATGTCGAAAATGTAGCTTCTCAAAGGGTGTTGGAAAAAGCTGGTTTTCAGAGGGAGGGAATTCTTAGAAAATATCTCTTCATTAAGGGAAAATGTAGAGATGTGGTTATGTTTAGTGTTTTATCAAATGATTTTCAAGTTTGA 573 0.3752 MEEIASFSKSDAKEEFVDVDLTQISLRPIVLSDLDDLMLWTSDEKVAKYCTWEPYTNKEYGINFIQNIASKSLWFRAICLQDRAIGCIDFKSCSGRCLEKSAELGYALSSKYWGKGIATLVMKQVIEVAFKEFSYLERLESRVDVENVASQRVLEKAGFQREGILRKYLFIKGKCRDVVMFSVLSNDFQV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03079 190 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 24 184 IPR016181 -
Vifa3g03079 190 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 24 185 IPR000182 GO:0016747
Vifa3g03079 190 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 17 187 - -
Vifa3g03079 190 Gene3D - 21 190 - -
Vifa3g03079 190 Pfam Acetyltransferase (GNAT) domain 25 160 IPR000182 GO:0016747
Vifa3g03079 190 CDD NAT_SF 77 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03079 Vifa-Chr3 884570759 884571331 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa3g03079 Acetyltransf_3 1.1e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03079 - - gmx:111043201 272.322