Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03073 ATGTCTATAGCATTTGCATCGGTGGATGATCTGCAGATGCAGTCTTCCCTTGGTATTCCATGGGGCACAGATGAATGTGGGAATATCATAGATGATACCTCATTGAACCTTTCCGTATCTCAAGACCAACCCTTTAGCATACATGATTTTTCACCTAGATGGGCTTATGCTGAATCAGAAATTCAGGTGTTTATTATTGGAACACTTTTGAAGAGTAAACCAAATGTGGAAACATGTAACTGGTCCTGTATGTTTGGGGAAGTTGAAGTTCCAGCTACTGTTTTAGCTAATGGAATTCTATGCTGTCAAGCTCCACCTCTTGAAATTGGACTGATCCCTTTCTACGTAACTTTTTCCAATAGATTTGCTTGTAGTGAAGGTACCAGAAAGTATATTAAGTTGAAACGTAAGACAGATGCTGATCAATCTAGTTCTGGAACTCCTAAGAAATCAAAAACTGAACATGTTCCCTATGCTGATAAACAACCGAATTCTGGCATGGGCCTTGGGAAGGTGGTTCTAAATGCAAGAGGCAGTTTACCAACAACAACTAGCAGAAAGGATGTGAGGAAGTATGATGATTTTGGCTTACCCATTGATGATGATGATAGCTTACTAGTTCCTGAAAAGAAAGAGGGAGATCAGGCTGAAGTCACTTCTGGTGTTGGCTCGATGAATGTGAAGAATAGCAGTAAAAATGGTAGAAAGAAAAGGCACAGAAGAGTGGATGCTTGA 735 0.4014 MSIAFASVDDLQMQSSLGIPWGTDECGNIIDDTSLNLSVSQDQPFSIHDFSPRWAYAESEIQVFIIGTLLKSKPNVETCNWSCMFGEVEVPATVLANGILCCQAPPLEIGLIPFYVTFSNRFACSEGTRKYIKLKRKTDADQSSSGTPKKSKTEHVPYADKQPNSGMGLGKVVLNARGSLPTTTSRKDVRKYDDFGLPIDDDDSLLVPEKKEGDQAEVTSGVGSMNVKNSSKNGRKKRHRRVDA 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03073 244 Gene3D Immunoglobulins 40 133 IPR013783 -
Vifa3g03073 244 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 4 142 - -
Vifa3g03073 244 Pfam IPT/TIG domain 47 126 IPR002909 -
Vifa3g03073 244 SUPERFAMILY E set domains 47 126 IPR014756 -
Vifa3g03073 244 MobiDBLite consensus disorder prediction 197 216 - -
Vifa3g03073 244 MobiDBLite consensus disorder prediction 136 170 - -
Vifa3g03073 244 MobiDBLite consensus disorder prediction 197 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03073 Vifa-Chr3 881565790 881566524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03073 1 126 CAMTA Transcription Factor Family AT5G64220 51.969 8.36e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03073 K21596 - gmx:100795682 205.682