Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03033 ATGGCTAAGTATCAAAATACTCCAATGCAAAACATGAGTTTCATTCTAACAACCTGTTTCCTCTTGAGTATAGCCTTAGCAAATGCTGAGTTTACCAAAAACACTTACATCATTCAAATGGAAAACTCGGCGAAACCAGAAGTGTTTTCCAGTCATCTAGATTGGTATTCATCAAAAGTGAAATCAGTTTTGTCTAAATCAGTAGAAGCTGAAATAGACAAGAATGCTGAAGAGAGAATCATTTACAGTTACAGCACTGCTTTTCATGGAATGGCTGCTAAATTAAGTGCAGAAGAAGCAAAAGGACTAGAATCTGAAGATGGTGTTGTAGCTATTTTCCCTGATACAAAGTATGAACTACACACTACAAGAAGTCCTTATTTTCTTGGTCTTGAACCAATTCAAACCAACAACAAAAGCTGGTCGGAGAAACTAGTTAGCCATGATGTTGTGGTTGGAGTTTTGGACACTGGTATTTGGCCTGAGAGTCAGAGTTTCAATGACGCCGGAATGACGCCGGTACCTTCTCATTGGAAAGGTGCATGTGAAACTGGTAGAGGGTTTCAAAAACATCATTGTAATAAGAAGATTGTGGGTGCAAGAATCTTCTACCATGGATATGAAGCAGCAACTGTTCATGGTGCTAATCTTCTTGGTTATGCTTATGGAACAGCAAGAGGAATGGCTCCAGGTGCAAGAATTGCAGCTTACAAAGTATGTTGGACTGGTGGATGTTTCAGCTCAGATATTCTATCAGCTGTTGATACAGCAGTAGCCGACGGAGTCAATGTTCTATCGATCTCTTTAGGTGGTGGAGTTTCGTCTTACTACCGCGATAGTCTATCCGTAGCTTCATTCGGAGCTATGGAAAAGGGTGTTTTCATTTCATGTTCAGCGGGAAACTCAGGACCTGAGCCTGTGAGCTTGACAAATGTTTCTCCATGGATCACAACAGTTGGAGCTAGCACAATGGACAGAGATTTTCCAGCAGATGTTAGCCTCGGAAATGGAAGAAAAGTAACCGGAACATCGCTCTATAAAGGACAAGCTATGCTCTCGGTTAGAAAACAGTACCCTCTGGTATACATGGGAGGTAACTCAACTAGTCCTGATCCAAGATCTTTGTGTTTAGAAGGTACTTTAGACCGTAAACTCGTAGCCGGGAAGATCGTGATTTGCGATAGAGGAATTAATCCTAGAGTTCAAAAGGGTCAAGTAGTGAAAAATGCAGGAGGTGTAGGAATGATTCTCACGAACACAGAAGCAAATGGTGAAGAGCTTGTAGCAGATTGTCACCTAATTCCTGCAATAGCAGTAGGAGAAAAAGAAGGCAAAAACATCAAACAATATGTGTTAACAAATAAAAAACCAACTGCAACATTAGCTTTTCTAAACACAAGATTAGGAATCAAACCATCACCTATAGTAGCTGCATTTTCATCAAGAGGGCCTAATTTGCTTACCCTCGAAATTCTCAAACCCGACATAGTAGCACCTGGTGTGAACATTCTTGCTGCATGGAGTGGTGTTACAGGTCCATCAAGCTTACAAACAGATCACAGAAGAGTGAAATTCAACATCCTTTCCGGGACTTCCATGTCGTGCCCTCATGTAAGTGGAATCGCGGCGATGATCAAAGCTAAACATCCTGAATGGAGTCCTGCTGCTATAAAATCCGCAATCATGACAACAGCTTATGTTCATGATAATACTATTAAACCTCTTAGAGACGCTTCTTCTGCCGAGTTTTCAACTCCTTATGATCACGGTGCAGGTCACATTAACCCTCGAAAAGCACTTGAACCAGGTTTAGTATATGATATTCAACCACAAGACTACTTTGAGTTTCTTTGCAAACAGAAACTGAGTCTTTCCGAATTAGGAATTTTTGCCAAACATTCAAACAAAACTTGCAAGCACACTCTTGCTAACGTAGGTGACTTGAACTATCCTGCTATATCAGTAGTGTTTCCTGAGAAAACAACTGGTTCAGCTTCGGCGATTCACAGAACTGTTACCAATGTTGGACCTGCTGTTTCAAAATATCATGTGATTGTTACGCCATTCAAAGGCGCTGAAGTTAAAGTTGAGCCTGATACATTGAAATTTACAAGGAAATATCAGAAGTTATCTTATAAGATTAGTTTCAAAATTACAACTAGGCAAAGTGAACCAGAATTTGGAGGTTTGGTATGGAAAGATGGGGTGCATAAAGTAAGAAGTCCTATTGTGATAACATATCTTCCACCAATGTGA 2256 0.4038 MAKYQNTPMQNMSFILTTCFLLSIALANAEFTKNTYIIQMENSAKPEVFSSHLDWYSSKVKSVLSKSVEAEIDKNAEERIIYSYSTAFHGMAAKLSAEEAKGLESEDGVVAIFPDTKYELHTTRSPYFLGLEPIQTNNKSWSEKLVSHDVVVGVLDTGIWPESQSFNDAGMTPVPSHWKGACETGRGFQKHHCNKKIVGARIFYHGYEAATVHGANLLGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDTAVADGVNVLSISLGGGVSSYYRDSLSVASFGAMEKGVFISCSAGNSGPEPVSLTNVSPWITTVGASTMDRDFPADVSLGNGRKVTGTSLYKGQAMLSVRKQYPLVYMGGNSTSPDPRSLCLEGTLDRKLVAGKIVICDRGINPRVQKGQVVKNAGGVGMILTNTEANGEELVADCHLIPAIAVGEKEGKNIKQYVLTNKKPTATLAFLNTRLGIKPSPIVAAFSSRGPNLLTLEILKPDIVAPGVNILAAWSGVTGPSSLQTDHRRVKFNILSGTSMSCPHVSGIAAMIKAKHPEWSPAAIKSAIMTTAYVHDNTIKPLRDASSAEFSTPYDHGAGHINPRKALEPGLVYDIQPQDYFEFLCKQKLSLSELGIFAKHSNKTCKHTLANVGDLNYPAISVVFPEKTTGSASAIHRTVTNVGPAVSKYHVIVTPFKGAEVKVEPDTLKFTRKYQKLSYKISFKITTRQSEPEFGGLVWKDGVHKVRSPIVITYLPPM 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03033 751 FunFam subtilisin-like protease SBT1.5 325 468 - -
Vifa3g03033 751 Pfam Subtilase family 148 570 IPR000209 GO:0006508|GO:0008236
Vifa3g03033 751 Pfam Fibronectin type-III domain 647 745 IPR041469 -
Vifa3g03033 751 Gene3D - 617 748 - -
Vifa3g03033 751 CDD Peptidases_S8_3 118 566 IPR034197 -
Vifa3g03033 751 FunFam Subtilisin-like protease SBT1.9 25 121 - -
Vifa3g03033 751 Pfam Peptidase inhibitor I9 35 121 IPR010259 -
Vifa3g03033 751 Pfam PA domain 357 447 IPR003137 -
Vifa3g03033 751 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Vifa3g03033 751 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Vifa3g03033 751 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Vifa3g03033 751 SUPERFAMILY Subtilisin-like 120 604 IPR036852 GO:0004252|GO:0006508
Vifa3g03033 751 CDD PA_subtilisin_like 331 461 - -
Vifa3g03033 751 Gene3D Peptidase S8/S53 domain 149 613 IPR036852 GO:0004252|GO:0006508
Vifa3g03033 751 Gene3D - 325 469 - -
Vifa3g03033 751 SUPERFAMILY Protease propeptides/inhibitors 34 118 - -
Vifa3g03033 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 52 744 IPR045051 -
Vifa3g03033 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 121 IPR037045 -
Vifa3g03033 751 ProSiteProfiles Serine proteases, subtilase domain profile. 128 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03033 Vifa-Chr3 863508275 863510745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03033 32 751 Subtilisin-like Serine Gene Family AT5G51750 67.686 0.0 1050
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03033 - - psat:127098601 1423.3