Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa3g03030 | ATGCCGTCCACTTCATCACCTCCACCACATCCTCCGCCCCAAACAAATAACAAAGAGACTCCCACCGTCGTCACTGGTTGCTCTTTCCTCTTCGCGCTTCTTCACTGCCTCCGCAACGAGAAACGAACAACTCCATCCTCCGACTCAGACTCCAACCCTCCTCATCCCTTCTCCTACTCCCTCCTCCGCCGCGCAACAAACTCGTTCTCCAATATTCTCGGTCATGGCGGATTTGGTCCTGTCTATTCCGGCACCCTCCCTTCCTCCGGTAAACCAATCGCCGTCAAGCTTATGGACTCTAGTACATCTTCCCTCGGCTGTCAAGGCGAACGTGAATATCACAACGAACTCTTCTTCGCCGCCAGGCTCCATTCCGACCTCCTCGTCCCCGCAATCGGTTTCTCATCCGACCGCAAACGCCGCAAATTCCTTCTCGTTTATGATCTCATGAAAAACGGTAATCTCCATGACGCGCTTTTCCGTAGTAAATGCCATGAATTAACGCACTGGAAAACGCGGTTTTCCATCATTCTCGACGTAGCGAAAGGAATTCAATATCTTCATTCTTGTGATCCCCCAATCATTCATGGTGATATTAAACCTAGTAATATTCTTCTTGATCATTCCTTTTCAGCTAAAATCGCTGATTTCGGTCTCGCGAGGTTGAAAACCGTTTCCCCTTTCGAATTCAGAAAAGATGAACTCGAGAGTGATGAGACGGAAATTGAGAGTGTTAATACTAGCTTAGAGGAATATGAAACAGACATGGTTGGTGTTGGTGGTGGCAGTGTGAAGGATTATGTAATGAATTGGATTGGTAAAGAAGTGAAAGAGGAAAGGTCGAAAAACGGTGAATTGTTGGTGGGTGGAAGTGGAAAGGTAGAGAAAAGCAAGAGCAAGAAGAAAATGAAGTGGTGGGAATCAATGGAAGAGGGGAATGGAAAGGGTGGTTTGAAGAAGGAAAAAAGAAGACCAGCAAGAGAATGGTGGAAGGAGGAGTTTTCTAAAGAACTCGCCAACAAGAACAAGAGGAAAGAGAGCGGAAAAAATGGTGATAGATGGTGGAAATGGGAGAGAGATCGCAACGATGTTGATGATGGCAATGTGAAGAAGAAAATGAGTAGTAAAAGCCGTAGCAGAAAGGAACGTGGTAGCGATGATTCATGGTTGAGTGGTGAGTTAAAGAGAGTCAATATGAATAGCTATGATTCATGTAATAGTGGAGAAATTTACAAGAGTGGTGAAATCAGCAGTACAACAAGTACTCGAGGAACTGTTTTCTACGTCGCGCCTGAAAACGGTTATAGTGGTGGTGATATAACAGAGAAATGTGATGTTTATAGTTTTGGGGTGTTGTTGCTTGTTATTGTTTCTGGGAGGAGGCCTCTTGAGGTGAATGATGGTGTACATGTTTCTGAGTTTAAGAGAGCCAATTTGGTGTCTTGGGCTAGACATTGTGGAAGGAATGGGAAACTACTTGAACTTATTGATCCTTGTGTTGAGTTGATGTTAGGGGATGATAGAGACCAGGCTCTTCTATGCATCAGAGTTGCATTGGTTTGTTTGATGAAATCGCCTAATCGTCGTCCTTCGATGAAACAAATTGTGGGGATGCTTAGTGGGGAGTTGGAACCACCTCGATTGTCACATGAGTGCTCGCAAACTCGATTCCAATTCAAGAATAAAAAAGAAAATTTGTGA | 1701 | 0.4462 | MPSTSSPPPHPPPQTNNKETPTVVTGCSFLFALLHCLRNEKRTTPSSDSDSNPPHPFSYSLLRRATNSFSNILGHGGFGPVYSGTLPSSGKPIAVKLMDSSTSSLGCQGEREYHNELFFAARLHSDLLVPAIGFSSDRKRRKFLLVYDLMKNGNLHDALFRSKCHELTHWKTRFSIILDVAKGIQYLHSCDPPIIHGDIKPSNILLDHSFSAKIADFGLARLKTVSPFEFRKDELESDETEIESVNTSLEEYETDMVGVGGGSVKDYVMNWIGKEVKEERSKNGELLVGGSGKVEKSKSKKKMKWWESMEEGNGKGGLKKEKRRPAREWWKEEFSKELANKNKRKESGKNGDRWWKWERDRNDVDDGNVKKKMSSKSRSRKERGSDDSWLSGELKRVNMNSYDSCNSGEIYKSGEISSTTSTRGTVFYVAPENGYSGGDITEKCDVYSFGVLLLVIVSGRRPLEVNDGVHVSEFKRANLVSWARHCGRNGKLLELIDPCVELMLGDDRDQALLCIRVALVCLMKSPNRRPSMKQIVGMLSGELEPPRLSHECSQTRFQFKNKKENL | 566 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa3g03030 | 566 | PANTHER | OS07G0586332 PROTEIN | 260 | 563 | IPR044576 | - | |
Vifa3g03030 | 566 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 248 | - | - | |
Vifa3g03030 | 566 | Gene3D | Transferase(Phosphotransferase) domain 1 | 394 | 559 | - | - | |
Vifa3g03030 | 566 | SMART | serkin_6 | 67 | 539 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa3g03030 | 566 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Vifa3g03030 | 566 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Vifa3g03030 | 566 | ProSiteProfiles | Protein kinase domain profile. | 67 | 548 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa3g03030 | 566 | MobiDBLite | consensus disorder prediction | 365 | 388 | - | - | |
Vifa3g03030 | 566 | FunFam | Os07g0541700 protein | 150 | 230 | - | - | |
Vifa3g03030 | 566 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 194 | 206 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa3g03030 | 566 | Gene3D | Phosphorylase Kinase; domain 1 | 55 | 149 | - | - | |
Vifa3g03030 | 566 | SUPERFAMILY | Protein kinase-like (PK-like) | 51 | 547 | IPR011009 | - | |
Vifa3g03030 | 566 | Pfam | Protein kinase domain | 418 | 536 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa3g03030 | 566 | Pfam | Protein kinase domain | 71 | 222 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa3g03030 | 566 | Coils | Coil | 235 | 255 | - | - | |
Vifa3g03030 | 566 | MobiDBLite | consensus disorder prediction | 294 | 324 | - | - | |
Vifa3g03030 | 566 | MobiDBLite | consensus disorder prediction | 283 | 324 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa3g03030 | Vifa-Chr3 | 863151861 | 863153561 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa3g03030 | 419 | 539 | Receptor kinase-like Gene Family | AT3G58690 | 32.540 | 9.97e-10 | 58.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XI | Vifa3g03030 | Pkinase | 7.5e-25 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa3g03030 | - | - | psat:127097028 | 927.546 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g04060 | 1 | 623913726 | 623915744 | Vifa3g03030 | 3 | 863151861 | 863153561 | PCT |