Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03026 ATGTCTGTGTCAGTTCACATCGCTGCTACCACTATACTCTCCTTGCATCTTCTTCTCTTCTTTGTTAATGCTAACTCATCCATGGATCCATACAAAGTACTCAACTTAATCCTCAACCCAAACGGCACTGTCACACGCTTACAAAAAATCCCACAATCCCCTCCCTCACCGGATCCAAATCTTCCCACACCAGCTCTCTCCAAAGACCTCACAATCAACCAATCGAAACACACTTGGGCTCGAATCTACCTTCCCCACAAACTAAACTCCAAGAAGAAGCTACCACTCATCATCTTCTACCACGGCGGCGGCTTCATTTTCTACAACGCCGCTTCAACTTACGTCCACGACTTCTGCGCCGAAATCGCCAACAAAACTCAATCCGTCGTCGTTTCACTCGACTACCGCCTCGCACCAGAACACCGTCTTCCCGCCGCGTACGATGACTCCGTGGAAATTATTCATTGGATTAGAATCTCAAACGACGCATGGCTGACACGGCATGCTGATTACTCACGATGTTATCTCATGGGAGAGAGTGCTGGAGGTAATATCGCCTACACCGCGGGTCTACGTGCGGCTGCGATAGTTGATGAGATTAAACCAATTAGCATCAAAGGGTTGATATTGATTCAACCGTTTTTTGGTGGGACCAAAAGGACTCCGTCTGAGATAAGGCTTGAGAAGGATTTGAATCTACCTTTGATTTTTACTGATGCGTTGTGGGAATTGTCGTTACCCGTAGGCGTTGATCGTGATTACGTGTATTCTAATCCAACGGTGAATGGTGGTGATAAAGTTTTGGAGAAGATTAGGTTGTTAGGGTGGAAGGTTGGGGTTTTTGGGTGTGATGGGGATCAACTTGTGGACCGTCAGAGGGAATTAGTGAAGTTGCTTGAGGGTAAAAGTGTCCATGTTGTTGGACAATTTTATAGTGGGGGTAGACATGGTATTTTTATGGGTGATCCTTCCATGTCTGAAAAAGTGTTTGATTTAGTGAAGAGTTTCTATTGA 1014 0.4566 MSVSVHIAATTILSLHLLLFFVNANSSMDPYKVLNLILNPNGTVTRLQKIPQSPPSPDPNLPTPALSKDLTINQSKHTWARIYLPHKLNSKKKLPLIIFYHGGGFIFYNAASTYVHDFCAEIANKTQSVVVSLDYRLAPEHRLPAAYDDSVEIIHWIRISNDAWLTRHADYSRCYLMGESAGGNIAYTAGLRAAAIVDEIKPISIKGLILIQPFFGGTKRTPSEIRLEKDLNLPLIFTDALWELSLPVGVDRDYVYSNPTVNGGDKVLEKIRLLGWKVGVFGCDGDQLVDRQRELVKLLEGKSVHVVGQFYSGGRHGIFMGDPSMSEKVFDLVKSFY 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03026 337 PANTHER ARYLACETAMIDE DEACETYLASE 46 310 - -
Vifa3g03026 337 SUPERFAMILY alpha/beta-Hydrolases 39 318 IPR029058 -
Vifa3g03026 337 Gene3D alpha/beta hydrolase 31 337 IPR029058 -
Vifa3g03026 337 Pfam alpha/beta hydrolase fold 97 319 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03026 Vifa-Chr3 861456732 861457745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03026 41 333 Carbohydrate Esterase AT5G16080 35.294 4.55e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03026 - - gmx:100777262 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04084 1 628617275 628618273 Vifa3g03026 3 861456732 861457745 PCT
Vifa3g03026 3 861456732 861457745 Vifa1g04079 1 627919527 627920621 PCT