Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03018 ATGTCTGTGTCGCTACGCAATGCTGCTACTACTATTCTCTCTTTGCATCTCCTTCTCTTCCTTGTTAATGCTAACTCATCTATGGATTCATACAAAACACTCAAAATGATCTTCAACCCAAACGCCACTGTCCCACAATCACCTCCACGCACACCCGCTTTCTTCAAAGACATCACCATCAACCAATCAAAACATACTTGGGCTAGAATCTACCTTCCCCGCAAACCAAACTCCATAAAGCTACCCCTCATTTTCTTCTTCCACGGCGGCGGCTTCCTTTTCTACAGCCCCGCTACAGCTTACGTCCACAGCTTTTGCACCGATCTCGCCATCAAAACTCAATCCGTCGTCGTTTCACTCAACTACCGCCTCGCACCACAGCACCGTCTTCCCGCGGCGTATGAAGACTCCGTGGAGCTTCTTCGCTGGATTAAAACCTCAAACGACTCATGGTGGAAACGTCATGCTGATTACTCAACATGTTATCTCATGGGTGAGAGTGCTGGAGGTAATATCGCATACAACACGGGTCTACGCGCGGCTGCAATAGTTGATGAGATTAAACCGGTTATCATCAAAGGGTTGATATTGATTCAACCGTTTTTTGGTGGGACAAAGAGGACACCATCTGAGTTAAGGCTTGAGAAGGGTACGAATCTACCTTTGACTGTTACTGATTCGATGTGGGAATTGTCTTTACCCGTAGGTGTTAATCGTGACTACGTGTATTCTAATCCAACGGTGAATGGGGGTGATAAGGTATTGGAGAAGATTAGTTTGTTTGGGTGGAAGGTTGGGGTTTTTGGGTGTGATGGGGATCAACTTGTCGACCGTCAGAGGGGATTTGTGAAGTTGCTTGAGGGTAAAAGTATCCATGTTGTTGGACGATTTTATAGTGGGGGTAGACATGGTATTTTTATGGATAATAATACCATGTCTGAAAAAGTGTTCGATCTAGTCAAGAGTTTCAATTCATGA 978 0.4519 MSVSLRNAATTILSLHLLLFLVNANSSMDSYKTLKMIFNPNATVPQSPPRTPAFFKDITINQSKHTWARIYLPRKPNSIKLPLIFFFHGGGFLFYSPATAYVHSFCTDLAIKTQSVVVSLNYRLAPQHRLPAAYEDSVELLRWIKTSNDSWWKRHADYSTCYLMGESAGGNIAYNTGLRAAAIVDEIKPVIIKGLILIQPFFGGTKRTPSELRLEKGTNLPLTVTDSMWELSLPVGVNRDYVYSNPTVNGGDKVLEKISLFGWKVGVFGCDGDQLVDRQRGFVKLLEGKSIHVVGRFYSGGRHGIFMDNNTMSEKVFDLVKSFNS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03018 325 PANTHER ARYLACETAMIDE DEACETYLASE 50 297 - -
Vifa3g03018 325 Pfam alpha/beta hydrolase fold 84 306 IPR013094 GO:0016787
Vifa3g03018 325 SUPERFAMILY alpha/beta-Hydrolases 42 320 IPR029058 -
Vifa3g03018 325 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 84 100 IPR002168 GO:0016787
Vifa3g03018 325 Gene3D alpha/beta hydrolase 21 325 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03018 Vifa-Chr3 860184745 860185722 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03018 45 320 Carbohydrate Esterase AT5G16080 35.986 1.15e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g03018 - - gmx:100777262 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03018 3 860184745 860185722 Vifa3g03018 3 860184745 860185722 ECH
Vifa3g03018 3 860184745 860185722 Vifa1g04084 1 628617275 628618273 PCT