Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02936 ATGGCGCTGGGTGTACCCGCTGTTCCGTTCACGTACGTTGTTCATGTTCTTGGTGTTGTCGCCGCCGTGTTGGTGTTGGTATGGAATATACACTTCAGAGGTGGGTTGGCTTGGAGTTCTCACAACAAAGCTCTCATCTTCAATCTTCATCCTGTTCTTATGCTTATTGGCTTAATAATATTTGGAGGTGAAGCAATTATAAGTTACAAATCTCTTCCATTGAAGAAGGAAGTGAAGAAACTGATACACCTTGTTCTCCACGCGATTGCATTAATACTTGGAATAATTGGAATTCTTGCTGCGTTCAAGAATCATAATGAAAGTGGGATTGCCAATCTGTACAGCTTGCATTCATGGCTTGGAATTGGGGTTATTTCCTTTTATGGCATTCAGTGGATATTTGGGTTTGTGGTATTTTTCTACCCTGGTGGGAGTTCAGAGATAAGACGTGAGTCAGTTCCATGGCATGTATTATTTGGGCTGTTTGTGTATATTTTAGCTCTTGCCACTGCTTCTCTCGGGTTTCTGGAAAAGCTCACATTCTTGGAAAGTTCAGGAGTTGCAAAATATGGTTCTGAGGCTTTACTTGTCAACTTCACTGCAATAATCACAATCTTATTTGGTACTTTTGTTGTATTATCTGCCATATCTCAAGCTCCACCAGCTACTGATGACTATGCACCCATATCAGCTAATTAA 699 0.4092 MALGVPAVPFTYVVHVLGVVAAVLVLVWNIHFRGGLAWSSHNKALIFNLHPVLMLIGLIIFGGEAIISYKSLPLKKEVKKLIHLVLHAIALILGIIGILAAFKNHNESGIANLYSLHSWLGIGVISFYGIQWIFGFVVFFYPGGSSEIRRESVPWHVLFGLFVYILALATASLGFLEKLTFLESSGVAKYGSEALLVNFTAIITILFGTFVVLSAISQAPPATDDYAPISAN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02936 232 CDD Cyt_b561_ACYB-1_like 40 183 - -
Vifa3g02936 232 PANTHER CYTOCHROME B561-RELATED 1 217 IPR043205 GO:0016491
Vifa3g02936 232 SMART 561_7 49 175 IPR006593 -
Vifa3g02936 232 FunFam Cytochrome b reductase 1 5 224 - -
Vifa3g02936 232 Gene3D - 3 224 - -
Vifa3g02936 232 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Vifa3g02936 232 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02936 Vifa-Chr3 825662343 825667168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02936 1 218 Chloroplast and Mitochondria Gene Families AT4G25570 70.183 5.57e-109 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02936 K08360 - gmx:100306179 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02936 3 825662343 825667168 Vifa3g02936 3 825662343 825667168 ECH