Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02910 ATGAAAAGAAAAAATATCATAAAATCTTCACTTGAATCCTCAAATCTCACACATGATATTCACTCGCGAGTTTTTCCCTACTTTTCTTCTTGGCAAAAATCACATGGTAAAGTATTTGTGTATTGGCTAGGGACGGAACCGTTTTTGTACATTGCAGATGCAGAATTCTTGAAGAAAATGTCAACAGAAGTAATGGCAAAGAGATGGGGAAAACCTAATGTTTTTAGAAATGATAGAGATCCCATGTTTGGAAGTGGTTTGGTCATGGTAGAGGGAAATGATTGGGTTCGACATCGTCACATTGTTGCACCAGCATTCAATCCTCTTAACCTCAAGGTGATGGCAAACATGATGATTGAGTCTACAAATCAAATGATAAATAAATGGACTAACCAAATAAACTTTGGCAACCTTGAAATTGATGTGGAGAAAGAAATTATAACAATAGCTGGAGAGATTATAGCAAAAACAAGTTTTGGTGTGGAAGATGAAAATGCTAAAGAGGTTTTTAACAAATTAAGAGCCTTACAGATGACTCTCTTTAACACCACTAGATATGTTGGTGTTCCATTTGGCAAGTTTTTTAATGTCAAAAATGACTTGGAGGCTAAGAAACTTGGCAAAGAAATAGACAAGCTCTTATTGTCAATTGTAGAATCTAGGAAAAATTCAACTAATAAGAGTTCTCAAAAAGACTTATTAGGGTTATTGCTACAAGAAAACAATCATGTTGATCGATTGGGAAAGACATTAACATCAAGAGAAGTGGTTGATGAGTGCAAAACTTTCTTTTTTGGTGGACATGAAACAACAGCACTTGCTATCACATGGACTTTGTTGCTTCTAGCCATGCATGAAGATTGGCAGAATGAATTAAGAGAAGAGATTAAACAAGTGGTGGGAAATAATGAGATTGATATCACTATGCTTGCTGGTTTAAAGAAGATGAAGTGGGTGATGAATGAAGTTCTAAGACTATACCCACCAGCACCAAATGTGCAAAGACAAGCAAGAGAAGACATTCGAGTTGATGATGTAACAGTGCCTAACGGAACAAACATGTGGATCGATGTTGTAGCGATGCACCACGATCCTAAATTATGGGGAGAAGATGTGAATGAGTTCAAACCAGAGAGGTTCATGGATGATGTGAATGGTGGATGCAAACACAAAATGGGGTATTTGCCATTTGGATTTGGAGGGAGAATGTGTGTGGGTAGAAACTTGACATTTATGGAGTATAAGATAGTATTAACAACACTTCTCTCTAATTTTAGTTTTAAGGTTTCACCAAGTTACCATCATTCACCAGCCATCATGCTCTCCCTTAGGCCTACTCATGGACTTCCACTCATAGTTGAACCCCTTAATTAG 1374 0.3697 MKRKNIIKSSLESSNLTHDIHSRVFPYFSSWQKSHGKVFVYWLGTEPFLYIADAEFLKKMSTEVMAKRWGKPNVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPLNLKVMANMMIESTNQMINKWTNQINFGNLEIDVEKEIITIAGEIIAKTSFGVEDENAKEVFNKLRALQMTLFNTTRYVGVPFGKFFNVKNDLEAKKLGKEIDKLLLSIVESRKNSTNKSSQKDLLGLLLQENNHVDRLGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHEDWQNELREEIKQVVGNNEIDITMLAGLKKMKWVMNEVLRLYPPAPNVQRQAREDIRVDDVTVPNGTNMWIDVVAMHHDPKLWGEDVNEFKPERFMDDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTTLLSNFSFKVSPSYHHSPAIMLSLRPTHGLPLIVEPLN 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02910 457 Gene3D Cytochrome P450 9 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 448 - -
Vifa3g02910 457 Pfam Cytochrome P450 23 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 PRINTS E-class P450 group I signature 32 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 PRINTS E-class P450 group I signature 358 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Vifa3g02910 457 SUPERFAMILY Cytochrome P450 18 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 PRINTS P450 superfamily signature 318 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02910 457 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02910 Vifa-Chr3 818093245 818095282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02910 6 456 Cytochrome P450 AT5G52400 62.914 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02910 - - gmx:100785284 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02910 3 818093245 818095282 Vifa3g02910 3 818093245 818095282 ECH