Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02909 ATGATTCGATCGGTTTCGGTGACGATGAACTTCGCCGTGGCTTTTGCATTGGTGTGTATAATCACGGTGGTGCCATGGCGCGTTGAATCACAAGAAGAACAGAGACTTTTGGTTAACATGACGATCGTTAGGAACGCACGTGATACTGGAGCTCTTTGCTTGGATGGGAGTTTACCGGGTTATCATTTGCACAGAGGTTATGGAGCAGGGGAGAATAATTGGCTTCTACAATTTGAGGGTGGTGGATGGTGCAATGACTTGCAATCATGCTTGGAGAGAGCACCAACTCGTAGGGGTTCAACAAAGCACATGAACAAGTTTGCGGTTTTCTCGGGTATTTTGAGCAACAATGCCACCCTTAATCCAGACTTTTACAATTGGAACCGGGTGAAATTGAGATACTGTGATGGAGCTTCATTTACTGGAAACAGATTGTTCAAAAATGGGACAACAACACTTTACTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTGAGGATCTTCTACCAAAAGGTTTAGGAAAGGCATACAAGGCTTTGCTTTCTGGCTGTTCAGCAGGAGGTTTAGCCACCTTTCACCATTGTGACAACTTCACTAACTATTTGCCAACAACTACTACTGTTAAATGCTTGAGTGATGCAGGTTTTTTCCTTGATGGAAGAGATGTCAGTTTGAATCATACTATGAGGTACTTCGTCAAAAGTCTAGTTACATTGCAGGGGATAGAGCAGAACCTTAATGAAAACTGCACCACTGCACTTTCCTACCCAGACTTGTGCTTCTTTCCACAATATGGGTTGAAATATATATCAGCACCGTTTTTTATCTTGAATTCTGCCTATGATGTATTCCAGTTCCATCATATATTGGCGCCACCTTCAGCTGATCCCTTCGGGCACTGGAATCACTGCAGGGTGAACAAGTCGACATGCACGCCAGCCCAAATTAATATATTGCAAGGTTTTAGGCTCAGCATGCTTGCAGCTTTGAAACCGTTCTACTTTTATTCGAACAGAGGGGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAATCGCAAGAAACATGGTTTGGAGACGATTCTCCTAGAATAAACAACAAGACTATTGCAGAAGCAGTTGGTGATTGGTATTTTAGTAGAAACAGAAGCAAGCAAATAGATCGTCCCTATCCATGTGATAATGATAAAACTTGTCATAACTTAATACCATAA 1221 0.4193 MIRSVSVTMNFAVAFALVCIITVVPWRVESQEEQRLLVNMTIVRNARDTGALCLDGSLPGYHLHRGYGAGENNWLLQFEGGGWCNDLQSCLERAPTRRGSTKHMNKFAVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGNRLFKNGTTTLYFKGQKIWEAIIEDLLPKGLGKAYKALLSGCSAGGLATFHHCDNFTNYLPTTTTVKCLSDAGFFLDGRDVSLNHTMRYFVKSLVTLQGIEQNLNENCTTALSYPDLCFFPQYGLKYISAPFFILNSAYDVFQFHHILAPPSADPFGHWNHCRVNKSTCTPAQINILQGFRLSMLAALKPFYFYSNRGGMFINSCFAHCQSESQETWFGDDSPRINNKTIAEAVGDWYFSRNRSKQIDRPYPCDNDKTCHNLIP 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02909 406 Pfam Pectinacetylesterase 32 384 IPR004963 GO:0016787
Vifa3g02909 406 PANTHER NOTUM-RELATED 17 403 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02909 Vifa-Chr3 817355888 817361928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02909 2 406 Carbohydrate Esterase AT5G23870 63.391 0.0 543