Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02904 ATGAAGAAACAAAAGTTTAGATTCTTCTCTTCAACCGCACACTCTGGTGTTAGGGTTTTGGAAATCACCGGCAAGAGAGGAGAGATGGCTCCTAAGCAACCCAGTACGGGTCTTTTCGTTGGATTGAACAAGGGTCACATCGTCACCAAGAAGGACTTGGCACCACGTCCCTCAGCTCGCAAGGGGAAAACAAGCAAGAGAGTTCACTTTGTGAGAAATCTCATAAGGGAGGTAGCTGGATTTGCACCTTATGAGAAACGTATCACTGAGTTGCTCAAGGTTGGAAAAGACAAGAGGGCATTGAAAGTTGCAAAGAGGAAGCTCGGAACCCACAAGCGTGCCAAGAAGAAGAGAGAAGAGATGTCCAATGTTCTAAGAAAGATGAGGGCTGGTGGTGCTGGAGATAAGAAGAAATAG 417 0.4628 MKKQKFRFFSSTAHSGVRVLEITGKRGEMAPKQPSTGLFVGLNKGHIVTKKDLAPRPSARKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02904 138 MobiDBLite consensus disorder prediction 107 138 - -
Vifa3g02904 138 PANTHER 60S RIBOSOMAL PROTEIN L36 17 136 IPR000509 GO:0003735|GO:0005840|GO:0006412
Vifa3g02904 138 MobiDBLite consensus disorder prediction 115 138 - -
Vifa3g02904 138 FunFam 60S ribosomal protein L36 29 134 - -
Vifa3g02904 138 ProSitePatterns Ribosomal protein L36e signature. 83 93 IPR000509 GO:0003735|GO:0005840|GO:0006412
Vifa3g02904 138 Gene3D 60S ribosomal protein L36 27 135 IPR038097 -
Vifa3g02904 138 Pfam Ribosomal protein L36e 36 129 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02904 Vifa-Chr3 816718567 816720446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02904 29 138 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 79.091 1.34e-57 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02904 K02920 - zju:107414508 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02904 3 816718567 816720446 Vifa3g02904 3 816718567 816720446 ECH