Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02871 ATGGCGGTAGAACTTTCAACCGCCACAACCTTAAAGCCCTACAATCTCCTCCATACCTCTTCCCCTAAAACAACCTCAACAATATTCTTCACCCCCTTAACAACCTTTCGTCATAAAACACTCCTTAAAACCCAAAGAAATTCAAGAACATCACCCTTCACCGTTTGTGTTCTAATGGAGGACCCAAAACACACAACCCAAATCAACACGGAAGAAAAAACAGAACTCCCTAATAATAAACCCAACCCTCAATTCTCACTTTCACAAAAACTGGCAAGAAAGAAGTCACAAAGGTCCACTTACCTAGTTGCCGCTGTAATGTCTAGCTTTGGTGTTACCTCTATGGCTATCTTAGCAGTTTATTATAGATTTTCATGGCAAATGGAGGGTAGTGGAGAAGTTCCATGGTCTGAAATGTTTGGCACATTTGCACTCTCAGTGGGTGCTGCTGTTGGTATGGAGTTTTGGGCAAGATGGGCTCATGAGGTTCTATGGCATGCTTCCTTATGGCACATGCATGAGTCACATCATCGACCTAGAGAAGGTCCATTTGAGCTTAATGATGTTTTTGCAATAATTAACGCTGTTCCTGCAATTGCTCTTCTCTCATACGGTTTTTTCAACAAGGGATTGGTTCCTGGGCTCTGTTTTGGTGCAGGTCTTGGGATTACAGTGTTTGGGATTGCCTACATGTTTGTTCATGATGGATTGGTTCATAAGAGATTCCCTGTAGGTCCTATTGCTAATGTGCCTTACTTTACAAGAGTTGCTGCTGCTCACCAACTCCATCATTCGGACAAATTCAAAGGGGTGCCATACGGGCTCTTTTTGGGCCCAAAGGAAGTTGAAGAGGTAGGAGGACTAGAAGAGCTGGAGGAAGAGATAAGTAGAAGAACAAGATCTTATACTGGTTCATGA 918 0.4303 MAVELSTATTLKPYNLLHTSSPKTTSTIFFTPLTTFRHKTLLKTQRNSRTSPFTVCVLMEDPKHTTQINTEEKTELPNNKPNPQFSLSQKLARKKSQRSTYLVAAVMSSFGVTSMAILAVYYRFSWQMEGSGEVPWSEMFGTFALSVGAAVGMEFWARWAHEVLWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFNKGLVPGLCFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIANVPYFTRVAAAHQLHHSDKFKGVPYGLFLGPKEVEEVGGLEELEEEISRRTRSYTGS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02871 305 MobiDBLite consensus disorder prediction 71 87 - -
Vifa3g02871 305 MobiDBLite consensus disorder prediction 66 87 - -
Vifa3g02871 305 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 302 IPR045019 GO:0016491
Vifa3g02871 305 Pfam Fatty acid hydroxylase 149 276 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02871 Vifa-Chr3 807976195 807978501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02871 1 219 Chloroplast and Mitochondria Gene Families AT4G25700 60.793 4.39e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02871 K15746 - gmx:547758 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04446 1 691408552 691411067 Vifa3g02871 3 807976195 807978501 ECH
Vifa3g02871 3 807976195 807978501 Vifa3g02871 3 807976195 807978501 ECH
Vifa1g04446 1 691408552 691411067 Vifa3g02871 3 807976195 807978501 PCT