Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02850 ATGGCAGGAGAAACCGAATCCTTCATCGATAAGGTAGAAGAGAAATTTCATGATCACAACTCCGGTTCAGATTCGTATTCCGATTCTGATGACGACTCCAAGAAGAGGCCACCGAAGTTTGCCTCTAAAGTCAACAGTGTTTACCGTCTCTTCGGTCGTGATCGTCCCGTTCACAAGGTCTTAGGCGGTGGAAAACCTGCGGACATTTTACTTTGGAGGAACAAGAGATGCACGGGAATGGCACTTGGTGCTGGCACTGCATTGTGGGTTTTCTTTGAGTTGATGGAATACCACCTCATAACTCTTGTTTGCCATTTAATGATTTTGTCTCTTGGGGCCCTTTTCTTGTGGTCTAATGCATCTGTCTTTATCCACAAGTCTCCACTGCAAATCCCACATATTGCAGTTCCTCAGGAATGCGTTCTTGAAGCTGCTTCTGTTCTCAGAGTTGAAATCAACCAAATGTTCACTGTTTTGAGGGAAATTGGAACTGGAAGAGATATTAAGAAGTTTCTTACCGTTGTTGCTGGATTGTGGGTTATCTCAGTTATTGGTGGCTGGTTCAATTTCTTGACATTGTTTTATTTATTCTATTTATCATTGTTCACATTGCCACTGGTGTATGAGAAACATGAAGACCAGGTTGATGCACTAGCTGAGAAAGCAATGATTGAGATCAAGAAACAGTATGCAGTGCTTGACGCTAAGGTTTTGAGCCAGATACCAATTGCAGGGTTCAAAAAGGATTAG 750 0.4253 MAGETESFIDKVEEKFHDHNSGSDSYSDSDDDSKKRPPKFASKVNSVYRLFGRDRPVHKVLGGGKPADILLWRNKRCTGMALGAGTALWVFFELMEYHLITLVCHLMILSLGALFLWSNASVFIHKSPLQIPHIAVPQECVLEAASVLRVEINQMFTVLREIGTGRDIKKFLTVVAGLWVISVIGGWFNFLTLFYLFYLSLFTLPLVYEKHEDQVDALAEKAMIEIKKQYAVLDAKVLSQIPIAGFKKD 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02850 249 PANTHER RETICULON 43 242 - -
Vifa3g02850 249 Pfam Reticulon 67 222 IPR003388 -
Vifa3g02850 249 MobiDBLite consensus disorder prediction 1 39 - -
Vifa3g02850 249 MobiDBLite consensus disorder prediction 7 39 - -
Vifa3g02850 249 ProSiteProfiles Reticulon domain profile. 66 249 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02850 Vifa-Chr3 799939151 799940979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02850 - K20721 gmx:100790190 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00958 4 278594580 278596385 Vifa3g02850 3 799939151 799940979 ECH
Vifa6g03616 6 1191705207 1191706824 Vifa3g02850 3 799939151 799940979 ECH
Vifa3g02850 3 799939151 799940979 Vifa3g02850 3 799939151 799940979 ECH