Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02812 ATGAAAGATTGCGATAGTACTGGAGAATTGGCGTTTGAGGCGTTGAACTTGCGTAACTTAGGGTACCCTACTAATCAAGACTTCAACTATGAGGCATTAGCACCATTGCTTCAATTTCACTTGAACAATGCTGGAGATCCATTTCTTGGAAGTAGTTTCTCTCTAAATTCAATGAAATTTGAAGTTAGTGTACTTGATTGGTTTGCTAAACTATGGGAAATAGAGAAGAATGAGTACTGGGGATACGTCACTACTGGGGGAACCGAAGGCAATCTTCATGGAATTTTAGTAGGGAGAGAGCAGCTTCCAGATGGAATTCTATATACCTCAGAAGATTCACATTATTCAATATTCAAAATAGCAAGAATGTATAGAATGCAATGTGTGAAGGTTGCCTCTTTGATCTCTGGTGAAATCGATTGTGCTAAACTAGCGGCTTCTCTACTTGCCAACAAGAACAAACCAGCCATTATCAATTTAAACATAGGGACAACTTTAAAAGGAGCTATTGATGATCTTGATCTTGTAATTAAAACACTTGATAAATGTGGATTTACTAATGACCAATTCTACATTCACTGTGATGGAGCTCTTTATGGTATCATGGTGCCTTTCATGAAACAAGCTCAAAGGATTAGCTTCAAAAAACCTATTGGTAGTGTAACTATTTCAGGCCATAAGTTTTTAGGATGTCCATCACCTTGTGGTGTTTTGATAACTCGTTTGAAATATATCAATGCACTTTCAAGAGACGTTGACATCATTGCTTCAAGAGATGCCACAATTACAGGTAGTCGATGTGGACATGCTCCAATCTTCCTTTGGTATGCTCTCAAAAAAAGGGGTTTAACAGGACTTGAGAATGAAGTGCATAAATGCATATTCAAAGCACGTTACTTACTAAATCAACTACGTGCTGCTGGAATTGGTGCAATGTTAAATGAGTATAGCAACACAGTTGTTTTTGAGAGACCCTTAGATGACAACTTTACTCGTAGATGGAATTTGGCAAGCAATAAAAATATTGCACATGTGGTAGTGTTGAAGCATGTTACTATTGAAATGCTTGACACCTTTGTTTGTGAATTTGTCCAAAAACGATCTGTTTGGTATAAAGATGGACAAGTTCAGCCTCTATGCATTGCGAAAGATGTTGGTTCCAGAAGTTGTGCTTGTTCAATACACAAATTATCAAGAAATTATTAG 1206 0.3715 MKDCDSTGELAFEALNLRNLGYPTNQDFNYEALAPLLQFHLNNAGDPFLGSSFSLNSMKFEVSVLDWFAKLWEIEKNEYWGYVTTGGTEGNLHGILVGREQLPDGILYTSEDSHYSIFKIARMYRMQCVKVASLISGEIDCAKLAASLLANKNKPAIINLNIGTTLKGAIDDLDLVIKTLDKCGFTNDQFYIHCDGALYGIMVPFMKQAQRISFKKPIGSVTISGHKFLGCPSPCGVLITRLKYINALSRDVDIIASRDATITGSRCGHAPIFLWYALKKRGLTGLENEVHKCIFKARYLLNQLRAAGIGAMLNEYSNTVVFERPLDDNFTRRWNLASNKNIAHVVVLKHVTIEMLDTFVCEFVQKRSVWYKDGQVQPLCIAKDVGSRSCACSIHKLSRNY 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02812 401 Gene3D - 36 278 IPR015421 GO:0003824
Vifa3g02812 401 PANTHER - 18 396 - -
Vifa3g02812 401 SUPERFAMILY PLP-dependent transferases 20 364 IPR015424 -
Vifa3g02812 401 Gene3D Aspartate Aminotransferase, domain 1 279 367 IPR015422 GO:0003824
Vifa3g02812 401 Pfam Pyridoxal-dependent decarboxylase conserved domain 59 316 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02812 Vifa-Chr3 787638197 787640440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02812 119 294 Calmodulin-binding Proteins AT1G65960 24.737 1.36e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02812 K25193 - gmx:100781665 630.557