Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02808 ATGGAGAGTGTAGAAGGAAACAACTCGGCAGTGAAAGTGGCTTTTATTCATGATGCTAATAAGCTCTCAAGGGAAGAAGAGAGACATGAAAATGTTGATGAAAACAACAGTGATAGATTTGCTATCACTCAGTGCATTGGTGAAACAGATACTCATTCGGATGCACTCATTACTCGCTATGCACACACTCTAACCAACTACAGCTTGCGTAACTTAGGGTACCCTGTTAATCAAGATTTCAACTATGAGGCGTTAGCACCGTTACTTCAATTTCACTTGAACAATGCTGGAGATCCATTTCTTGGAAGCGGTTTCTCTTTGAATTCAATGAAATTCGAAGTTAGTGTGCTTGATTGGTTTGCTAAACTATGGGAAATAGAGAAGAATGAGTACTGGGGATACGTCACTACTGGGGGAACCGAAGGCAATCTTCATGGAATTTTAGTAGGGAGAGAGCAACTTCCAGATGGAATTCTATATACCTCAGAAGATTCACATTATTCAATATTCAAAATAGCAAGAATGTATAGAATGCAATGTGTGAAGGTTGCCTCTTTGATCTCTGGTGAAATTGATTGTGCTCAACTAGAGACTTCTCTACTTGCCAACAAGAACAAACCAGCCATTATCAATTTAAACATAGGGACAACATTGAAAGGCGGTATTGATGATCTTGATCTTGTAATTAAAACAATTGATAAATGTGGATTTACTAATGATCAATTCTACATTCACTGTGATGGCGCTCTTTTTGGAATAATGTTGCCTTTTATGAAACAAGCTCTAAGGATTAGCTTCAAGAAACCTATTGGCAGCGTAACTATTTCAGGCCATAAGTTTTTAGGATGTCCATCACCTTGTGGTGTTTTGATAACTCGTTTGAAATACATCAATGCACTTTCAAGAGATGTTGACATCATTTCTTCAAGAGATGCCACAATAACAGGTAGTCGTTGTGGACATGCTCCAGTCTTCCTTTGGTATGCTCTCAAAAAAAAGGGTTTAACAGGACTTGAGAATGAAGTGCATAACTGCATATTCAAAGCACGTTACTTACTAAATCAACTACGTGGTGCTGGAATTGGTGCAATGTTAAATGAGTATAGCAACATAGTTGTTTTTGAGAGACCCTTAGATGATAACTTCACTCGTAAATGGACTTTGGCAAGCGATAAAAATATTGCACATGTGGTAGTGATGAAGCATGTTACTATTGAAATGCTTGACACCTTTGTTCGTGAATTTGTCCAAGAACGTTATGTTTGGTATAAAGATGGACAAGTTCAGCCTCTATGCATTGCGAAAGATGTTGGTTCTAAAAATTGTGCTTGTTCAATACACAAATTATCAAGCAATTATTAG 1362 0.3752 MESVEGNNSAVKVAFIHDANKLSREEERHENVDENNSDRFAITQCIGETDTHSDALITRYAHTLTNYSLRNLGYPVNQDFNYEALAPLLQFHLNNAGDPFLGSGFSLNSMKFEVSVLDWFAKLWEIEKNEYWGYVTTGGTEGNLHGILVGREQLPDGILYTSEDSHYSIFKIARMYRMQCVKVASLISGEIDCAQLETSLLANKNKPAIINLNIGTTLKGGIDDLDLVIKTIDKCGFTNDQFYIHCDGALFGIMLPFMKQALRISFKKPIGSVTISGHKFLGCPSPCGVLITRLKYINALSRDVDIISSRDATITGSRCGHAPVFLWYALKKKGLTGLENEVHNCIFKARYLLNQLRGAGIGAMLNEYSNIVVFERPLDDNFTRKWTLASDKNIAHVVVMKHVTIEMLDTFVREFVQERYVWYKDGQVQPLCIAKDVGSKNCACSIHKLSSNY 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02808 453 Gene3D - 88 330 IPR015421 GO:0003824
Vifa3g02808 453 Gene3D Aspartate Aminotransferase, domain 1 331 418 IPR015422 GO:0003824
Vifa3g02808 453 Pfam Pyridoxal-dependent decarboxylase conserved domain 111 360 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vifa3g02808 453 SUPERFAMILY PLP-dependent transferases 73 417 IPR015424 -
Vifa3g02808 453 PANTHER - 22 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02808 Vifa-Chr3 786341964 786344143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02808 214 346 Calmodulin-binding Proteins AT1G65960 27.211 2.51e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02808 K25193 - gmx:100781665 656.366