Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02806 ATGGAGGGTGTAGAAGGAAACAACATGGCAGGGACATTGGCTTTTTTTCATGATGCTAATAAGCTCTCAAGAGAAGAAGAGAGACATGAAAATGTTGATGAAAACAACAATGATAGATTTGCTATCACTCAGTGCATTGGTGAAACCGATACTCATTTGGGTGCACTCATTACTCGCTATGCACAAACTCTAACCAACTATAGCTTGCGTAACTTAGGGTACCCTACTAATCAAGACTTCAACTATGAGGAATTAGCACCGTTGCTTCAATTTCACTTGAACAATGCTGGAGATCCATTTCTTGGAAGTAGTTTCTCTCTAAATTCAATGAAATTTGAAGTTAGTGTACTTGATTGGTTTGCTAAACTATGGGAAATAGAGAAGAATGAGTACTGGGGATACGTCACTACTGGCGGAACCGAAGGCAATCTTCATGGAATTTTAGTAGGGAGAGAGCAACTTCCAGATGGAATTCTATATACCTCAGAAGATTCACATTATTCAATATTCAAAATAGCAAGAATGTATAGAATGCAATGTGTGAAGGTTGCCTCTTTGATCTCTGGTGAAATTGATTGTGCTCAACTAGAGACTTCTCTACTTGCCAACAAGGACAAACCAGCCATCATCAATCTAAACATAGGGACAACTTTGAAAGGAGGTATTGATGATATTGATCTTGTAATTAAAACACTTGATAAATGTGGATTTACTAATGATCAATTCTACATTCACTGTGATGGAGCTCTTTGTGGAATAATGTTGCCTTTTATGAAACAAGCTCTAAGGATTAGCTTCAAGAAACCTATTGGCAGCGTAACTATTTCAGGCCATAAGTTTTTAGGATGTCCATCACCTTGTGGTGTTTTGATAACTCGTTTGAAATATATCAATGCACTTTCAAGAGACGTTGACATCATTGCTTCAAGAGATGCCACAATTACAGGTAGTCGTTGTGGACATGCTCCAGTCTTCCTTTGGTATGCTCTCAAAAAAAAGGGTTTAACAGGACTTGAGAATGAAGTGCATAACTGCATATTCAAAGCACGTTACTTACTAAATAAACTACGTCGTGCTGGAATTGGAGCAATGCTAAATGAGTATAGCAACATAGTTGTTTTTGAGAGACCTTTAGATGATAATTTTACTCGTAGATGGAATTTGGCAAGCAATAAAAATATTGCACATGTGGTAGTGTTGAAGCATGTTACTATTGAAATGCTTGACACCTTTGTTCGTGAATTTCTCCAAAAACGATCTGTTTGGTATAAAGATGGACAAGTTCAGTCTATATGCATTGCAAACGATGTTGGTTCTAGAAATTGTGCGTGTTCGATACACAAGTTATCAAGAAATATTAGTTAA 1365 0.37 MEGVEGNNMAGTLAFFHDANKLSREEERHENVDENNNDRFAITQCIGETDTHLGALITRYAQTLTNYSLRNLGYPTNQDFNYEELAPLLQFHLNNAGDPFLGSSFSLNSMKFEVSVLDWFAKLWEIEKNEYWGYVTTGGTEGNLHGILVGREQLPDGILYTSEDSHYSIFKIARMYRMQCVKVASLISGEIDCAQLETSLLANKDKPAIINLNIGTTLKGGIDDIDLVIKTLDKCGFTNDQFYIHCDGALCGIMLPFMKQALRISFKKPIGSVTISGHKFLGCPSPCGVLITRLKYINALSRDVDIIASRDATITGSRCGHAPVFLWYALKKKGLTGLENEVHNCIFKARYLLNKLRRAGIGAMLNEYSNIVVFERPLDDNFTRRWNLASNKNIAHVVVLKHVTIEMLDTFVREFLQKRSVWYKDGQVQSICIANDVGSRNCACSIHKLSRNIS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02806 454 Pfam Pyridoxal-dependent decarboxylase conserved domain 110 364 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vifa3g02806 454 Gene3D - 89 330 IPR015421 GO:0003824
Vifa3g02806 454 Gene3D Aspartate Aminotransferase, domain 1 331 420 IPR015422 GO:0003824
Vifa3g02806 454 PANTHER - 24 448 - -
Vifa3g02806 454 SUPERFAMILY PLP-dependent transferases 71 416 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02806 Vifa-Chr3 785355239 785357339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02806 214 346 Calmodulin-binding Proteins AT1G65960 27.211 8.04e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02806 K25193 - gmx:100781665 669.463