Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02795 ATGCTCATTTTTGGACTTCTTCTCCATCAAGCTACAAGGCTATTATCTTCTGATGAACAACATGTTGCAGGCTTAATGATTATGACATGGCATTCATCCACTCTTCAGTTAAACAATTCAGGTTTTGTTGAATCATGGTCAAAGGTTGATAATGAAGTTGGGGAGAAAGTTAACGGTGAACTTGTTGCAGCAAGAACTGTTGGTTCCACTGATGTTGTAGCTATTATTTGTCCATCCCATATTATAGTTTCAAACCGTGGTAATTCCATAGCGAACAATGGAGTGGATCAAGTTTCAAGAGAAAACACGTTTCGCGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGGAATCGAAGGCGAAATGCATACCTGAGGTTATTCTTCTTTGGTCTCTTAGTAGTCTCCGACATCAAAAATCCACCGGAGCTGCTCCGGTAGGTAAAGGATTCCTTCGCCTTTTCTTCTGTTCCACATCGTGA 477 0.4046 MLIFGLLLHQATRLLSSDEQHVAGLMIMTWHSSTLQLNNSGFVESWSKVDNEVGEKVNGELVAARTVGSTDVVAIICPSHIIVSNRGNSIANNGVDQVSRENTFREEEEEEEEEKESKAKCIPEVILLWSLSSLRHQKSTGAAPVGKGFLRLFFCSTS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02795 158 Coils Coil 95 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02795 Vifa-Chr3 780793203 780795934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02795 42 91 PP2C-type Phosphatase Gene Family AT1G17550 49.180 1.09e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02795 K14497 - gmx:102662702 62.3882