Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02794 ATGGATGTGAATTTGTCACAAGGTGGTGTTGGAAATTCTTTTGGTGGATTTGATTTACCTGGATCAATTCATGTTCATCATCAAGCACATCATCCTCACACCATTCATCAGCATCAACCTCATCCGCATGCGCGTCAAGGGTCTTCGCTACATTCATCGGTTCATGATGGGTTTTCTCTCTTACAGAACTGTGATCAAACTGTTTCGATGACGGATTACAGTAAGGGAGAGAGAAGCAAAAGCTCGACTAGTGATGAGGATGAGCCGAGTTTTAATGAGGATGGTTTAGAGAGTCAACAAGAAGGGGGTAGAGGGAAAAAGGGACCGTCTTCGCCTTGGCAGCGTGTGAAGTGGACTGATAAGATGGTGAGGCTTATGATAACTGCTGTTTCGTATATAGGTGAGGATATAACTTCTGATGGTGGTGGAAATGGAAGAAGGAAATTTACGGTTTTACAGAAAAAGGGTAAGTGGAAATCTGTATCGAAGGTTATGGCTGAAAGAGGTTATCATGTTTCGCCGCAACAATGCGAGGATAAGTTCAATGATCTTAATAAAAGGTATAAAAAGCTTAATGATATGTTAGGGAGAGGAACTTCTTGTGAGGTTGTTGAGAATCCGTCACTCTTGGGTGTTATTAATTTTCTTTCTGAGAAAGAAAAGGATGATGTTCGGAAAATATTAAGCTCGAAACACTTGTTTTATGAAGAGATGTGTTCTTATCATAATAGTAATAGGTTGCATTTGCCGCATGATCCTGCATTGCAATGTTCGATGCAGTTAGCTCTCCGAAATAGGGATGATCATGATCATGATAATGATGATGTCAGAATGTCCCATGTCGAGGATCATGATGATGATGAGCAAGATGTTGAGATTGAGGAACGCGATGATTCTAAAGTGCACTGTGCTTCCCGCGATGGTTATACGAAGAACTTGAAACAAATCCAAGGCCAAGAAGATGGGAACATTCTTGGTAATACTTCAAATTGTCAAGATCATTTCAACCAAGGTTCACATCCACACGGGCAAACGACTCATTCTGACGGTAACCAAGTTTTACCTGAAAACACGAGAGGAGCATGGTTACAGAAGCAATGGGTTGACATGCGCCAAGTTCAATTAGAAGAGCAAAAGCTACAAATTCAGGCGGAGACGTTAGAATTAGAGAAACAAAGGTTCAAGTGGCAGAGATTTAGTGAAAAAAAGGACCGGGAATTGGAGAAGATGAGTCTAGAAAATGAAAGAATGAAGCTTGAAAATGAACGCATGGCTTTAGAATTGAAGCGAAAGGAAATGGGAATCAACTTTAACTAG 1317 0.407 MDVNLSQGGVGNSFGGFDLPGSIHVHHQAHHPHTIHQHQPHPHARQGSSLHSSVHDGFSLLQNCDQTVSMTDYSKGERSKSSTSDEDEPSFNEDGLESQQEGGRGKKGPSSPWQRVKWTDKMVRLMITAVSYIGEDITSDGGGNGRRKFTVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCEVVENPSLLGVINFLSEKEKDDVRKILSSKHLFYEEMCSYHNSNRLHLPHDPALQCSMQLALRNRDDHDHDNDDVRMSHVEDHDDDEQDVEIEERDDSKVHCASRDGYTKNLKQIQGQEDGNILGNTSNCQDHFNQGSHPHGQTTHSDGNQVLPENTRGAWLQKQWVDMRQVQLEEQKLQIQAETLELEKQRFKWQRFSEKKDRELEKMSLENERMKLENERMALELKRKEMGINFN 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02794 438 Coils Coil 370 392 - -
Vifa3g02794 438 Gene3D - 118 190 - -
Vifa3g02794 438 PANTHER F16F4.11 PROTEIN-RELATED 6 436 - -
Vifa3g02794 438 MobiDBLite consensus disorder prediction 266 284 - -
Vifa3g02794 438 MobiDBLite consensus disorder prediction 266 300 - -
Vifa3g02794 438 Pfam Myb/SANT-like DNA-binding domain 115 241 IPR044822 -
Vifa3g02794 438 MobiDBLite consensus disorder prediction 26 40 - -
Vifa3g02794 438 MobiDBLite consensus disorder prediction 71 115 - -
Vifa3g02794 438 Coils Coil 400 436 - -
Vifa3g02794 438 MobiDBLite consensus disorder prediction 19 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02794 Vifa-Chr3 779853506 779854822 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vifa3g02794 Myb_DNA-bind_4 1.8e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02794 - - tpra:123906894 696.812