Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02778 ATGGCATCCTCCAAGCTAATGTCATCTTCCAATTCAATCACCTCCGACGCACCTTCGTCTCCATCCTCCAAACCTCATTTCACCACCTCCAATTTCCTCGTTTCCGACGCTTCCGACTTCTTCCCCGATCAACCTTCGCTCGCTGACGCCGTAGCGACTCCGAGAACCGTTGATGATGTTTGGAGAGAGATTGTTGCAGGAGATCATAGGGAGTGTAAGGAGGAGATTCCCGATGAGATGATGACGCTGGAGGATTTTCTCGTGAAAGCCGGTGCTGTCGACGGCGAAGACGTGGATGTGGATGAGGATGTTAAGATGAGTATACCTATGGCGGAGAATCTCAGTGGGAGTGGGGTGTTTTCTTTGGATTCGAGTTTTCATGGAGTTGAGAGTGTGGAGGGGTCTGTGGTGGGGTTTGGGAATGGAGTGGAGGTGGTTGAAGGTGGGAAGGGGAAGAGAGGACGCCCGGTTATGGAGCAGTTGGATAAGGCTGCTCAGCAGAGGCAAAGAAGAATGATAAAAAATAGAGAATCTGCTGCTAGGTCTAGGGAACGCAAGCAGGCTTACCAAGTGGAATTGGAGTCTTTAGCTGTGAAATTAGAGGAGGAAAATGACAGGTTGATCAAGGAAAAGGCTGAAAGGAAAAAGGAAAGGTTCAAACAGCTTATGGAAAAAGTGATTCCTGTCGCAGAGCAGCGAAGGCCACCAAGGTTACTCCGTAGGGTTCGTTCCTTGCAATGGTAG 744 0.496 MASSKLMSSSNSITSDAPSSPSSKPHFTTSNFLVSDASDFFPDQPSLADAVATPRTVDDVWREIVAGDHRECKEEIPDEMMTLEDFLVKAGAVDGEDVDVDEDVKMSIPMAENLSGSGVFSLDSSFHGVESVEGSVVGFGNGVEVVEGGKGKRGRPVMEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDRLIKEKAERKKERFKQLMEKVIPVAEQRRPPRLLRRVRSLQW 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02778 247 CDD bZIP_plant_BZIP46 167 213 - -
Vifa3g02778 247 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 51 233 IPR043452 GO:0003700|GO:0045893
Vifa3g02778 247 Coils Coil 186 217 - -
Vifa3g02778 247 SMART brlzneu 163 225 IPR004827 GO:0003700|GO:0006355
Vifa3g02778 247 SUPERFAMILY Leucine zipper domain 167 218 IPR046347 GO:0003700|GO:0006355
Vifa3g02778 247 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 170 185 IPR004827 GO:0003700|GO:0006355
Vifa3g02778 247 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 165 217 IPR004827 GO:0003700|GO:0006355
Vifa3g02778 247 MobiDBLite consensus disorder prediction 1 28 - -
Vifa3g02778 247 Gene3D - 165 217 - -
Vifa3g02778 247 Pfam bZIP transcription factor 165 222 IPR004827 GO:0003700|GO:0006355
Vifa3g02778 247 PRINTS cAMP response element binding (CREB) protein signature 105 120 - -
Vifa3g02778 247 PRINTS cAMP response element binding (CREB) protein signature 162 178 - -
Vifa3g02778 247 PRINTS cAMP response element binding (CREB) protein signature 180 200 - -
Vifa3g02778 247 PRINTS cAMP response element binding (CREB) protein signature 200 217 - -
Vifa3g02778 247 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 165 226 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02778 55 247 bZIP Transcription Factor Family AT5G44080 55.838 3.74e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vifa3g02778 bZIP_1 2.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02778 K14432 - gmx:100808917 227.639