Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02759 ATGGCTTCTGCTTCAAGTAGTGCTTTCTTCACTTTTCTTATAATCCTTACCTTTCTTTCGATCTCTCACATCAAAGTTTCTGAAGCACAAGCTACACCTCCTATAGTAAAGGGACTATCATGGACCTTCTATAATTCAAAATGTCCTAAGCTTGAATCTATCATCAGAAGTGAGCTCAAGAAAATCTTTGATAAAGATATTGGTCAAGCTGCTGGCTTACTTCGCCTTCACTTCCATGACTGCTTTGTTCAGGGTTGTGATGCATCAGTATTATTGGATGGATCAGCAAGTGGACCAAGTGAGAAAGATGCACCACCAAATTTGACTCTTAGGACTGAGGCCTTCAAGATAATCGAAAAACTTCGTAGCAGTGTCGAGAAGCAGTGTGGAAGAATCGTCTCTTGTGCTGATATCACCGCTGTTGCAGCGCGAGACGCCGTTTTCCTCTCAGGAGGACCAGAGTACAAAATTCCATTAGGAAGAAGAGATGGATTAACATTTGCAACAAGAGAAGTAACATTACAGAACCTTCCTTCACCAACAAGCAACACAACAACAATCCTAAACTCACTTGCAACCAAAAACCTTAACCCAACCGATGTAGTAGCACTCTCAGGTGGTCACACAATAGGCATAAGCCACTGCAGTTCTTTCACAAACAGACTCTACCCAACACAAGACACTGTCATGGACAAAACCTACGGCAAAAACCTTAAACTCACTTGTCCTACTAACACCACAGACAACACAACTGTTTTAGATATTCGTAGTCCTAACAAGTTTGATAACAAATACTATGTCGATCTTATGAATCGTCAGGGTCTTTTTACGTCGGATCAAGATTTGTATACTGATAAGAGGACTAAGAGTATTGTTACTGATTTTGCTGTGAATCAGTCTCTTTTCTTTGAGAAATTTATTGCTGCTATGCTTAAAATGGGTCAGCTTAATGTTTTGACTGGAAGTCAAGGAGAGATTCGTGCTAAGTGCTCTGTTAGAAATAAGGATAGCAAGTCTTTCATTGCTTCTGTTGCGGAAGATGTCGTTGAAGGATTTTTAGAAATGTAA 1068 0.4007 MASASSSAFFTFLIILTFLSISHIKVSEAQATPPIVKGLSWTFYNSKCPKLESIIRSELKKIFDKDIGQAAGLLRLHFHDCFVQGCDASVLLDGSASGPSEKDAPPNLTLRTEAFKIIEKLRSSVEKQCGRIVSCADITAVAARDAVFLSGGPEYKIPLGRRDGLTFATREVTLQNLPSPTSNTTTILNSLATKNLNPTDVVALSGGHTIGISHCSSFTNRLYPTQDTVMDKTYGKNLKLTCPTNTTDNTTVLDIRSPNKFDNKYYVDLMNRQGLFTSDQDLYTDKRTKSIVTDFAVNQSLFFEKFIAAMLKMGQLNVLTGSQGEIRAKCSVRNKDSKSFIASVAEDVVEGFLEM 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02759 355 Pfam Peroxidase 56 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 FunFam Peroxidase 178 313 - -
Vifa3g02759 355 CDD secretory_peroxidase 38 332 IPR033905 GO:0004601|GO:0042744
Vifa3g02759 355 PANTHER - 17 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 Gene3D - 42 331 - -
Vifa3g02759 355 ProSiteProfiles Plant heme peroxidase family profile. 38 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 SUPERFAMILY Heme-dependent peroxidases 33 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Vifa3g02759 355 FunFam Peroxidase 42 191 - -
Vifa3g02759 355 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02759 355 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Vifa3g02759 355 Gene3D Peroxidase, domain 2 179 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02759 Vifa-Chr3 765193441 765194826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02759 1 355 Peroxidase AT1G71695 58.611 5.14e-161 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02759 K00430 - gmx:100775837 553.132