Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02746 ATGTCTATGTTTATCAGTAATGGAGAGAATAAGCAATTTGATTATTTACGCGCTTTATATGAGGGTTGCATTGCTGGAGGTCTTGCTGGTGTTGCTGTAGAAGCAGCTTTATACCCCATTGATACCATCAAAACACGGCTACAGGTTGCTCGTGGTGGACTAAAAATTGATTTCAAAGGTTTGTATTCTGGATTGGCTGTAAACCTTGCTGGTTCCTTACCAGCTTCTGCAATTTTTATTGGTGTGTATGAACCAGCAAAGCAGAAATTGCTGGAGATCTTCCCTGAGAATCTAAACGCTCTGGCTCATATTGCTGCAGGTACTATTGGAGGAGCCGCTTCTTCTCTTGTTCGTGTTCCAACTGAGGTTATTAAGCAAAGGATACAAACCGGTCAGTTCAAATCAACCTCATCCGCTCTCCGTCTTATCATTGCTAATGAGGGTTTTAAAGGTCTTTATGCGGGATATAGATCTTTCTTATTGCGAGATTTACCATTTGATGCTTTAGAATTATGCATCTACGAACAGCTCCGTATCGGGTATAAAGTAGCGGCAAAAAGAGATCTGAATGATCCAGAGAATGCTATGATTGGTGCTTTTGCTGCTGCAATAACTGGAGCAGTTACAACTCCACTTGATGTAATAAAAACCAGATTGATGGTTCAGGGAACCCAAAAACATTACAAAGGCATATGTGATTGTGTAAGGACAATAGTTAAAGAAGAAGGAGCTAATGCTCTTTTTAAGGGTATTGGGCCAAGAGTGTTGTGGATAGGAATAGGTGGTTCAATATTTTTTGGTGTTCTTGAGAAGACAAAGAAAATTCTTGCTCAGAAGAACCCTCAAACATGA 852 0.4014 MSMFISNGENKQFDYLRALYEGCIAGGLAGVAVEAALYPIDTIKTRLQVARGGLKIDFKGLYSGLAVNLAGSLPASAIFIGVYEPAKQKLLEIFPENLNALAHIAAGTIGGAASSLVRVPTEVIKQRIQTGQFKSTSSALRLIIANEGFKGLYAGYRSFLLRDLPFDALELCIYEQLRIGYKVAAKRDLNDPENAMIGAFAAAITGAVTTPLDVIKTRLMVQGTQKHYKGICDCVRTIVKEEGANALFKGIGPRVLWIGIGGSIFFGVLEKTKKILAQKNPQT 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02746 283 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 21 283 - -
Vifa3g02746 283 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 20 280 - -
Vifa3g02746 283 ProSiteProfiles Solute carrier (Solcar) repeat profile. 193 275 IPR018108 -
Vifa3g02746 283 Pfam Mitochondrial carrier protein 98 178 IPR018108 -
Vifa3g02746 283 Pfam Mitochondrial carrier protein 193 279 IPR018108 -
Vifa3g02746 283 Pfam Mitochondrial carrier protein 21 52 IPR018108 -
Vifa3g02746 283 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 89 IPR018108 -
Vifa3g02746 283 ProSiteProfiles Solute carrier (Solcar) repeat profile. 98 180 IPR018108 -
Vifa3g02746 283 SUPERFAMILY Mitochondrial carrier 21 270 IPR023395 -
Vifa3g02746 283 Gene3D Mitochondrial carrier domain 21 283 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02746 Vifa-Chr3 761858505 761862631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02746 92 281 Chloroplast and Mitochondria Gene Families AT1G07030 31.980 1.51e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02746 K15111 - gmx:100800051 429.869