Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02704 ATGGAGATTCACATCCTGCTATTATTTGCCACCTTATCCTTTATCATAATCCGGTTCTTTCGAAACCATAAAAAGAATAAACCGCCCGGTCCAACCGGTCTACCCATAACCGGAAACCTCCATCAACTAGGCCCCCAACCCCACTCTTCTCTTTCTTCCCTGTCCAAAATCTATGGCCCTATCATGTCCCTCCGTTTCGGTTCCATCGATGTTACCGTCGCCTCCTCCCCTACAACCGCCCAAGAAATCCTCCAAAAAAACGATGAATCCTTCGCCAACCGCCCTATCCCGGAATCAGTCGCCGCCCAACCTAACGTCAACGACACCCTAGCTTGGGCACCCGCCAACCCACGGTGGCGTAACCGTCGTCGCATATGCACCACTCAAATATTCACATCCCAACGCCTCGACCTCCTCCAACACCTCCGCCACCGGAAAGTTCAGGAACTAGTTCAACACCTTCACAAAAAAGCTGCGGAAAGAACAACAGTTGACATCGGGGAGCTAGCTTTCGCCACCATGCTGAACTTGGTTTCGAATACAGTATTCTCTGAGGATATTGTTGACTCGGAGTTCGAGAGTGCTGGTGAGTTTAAGGAGCTTGTGTGGAGGATTATGGAGGATGCTGGAAAAGTGAACGTTTGTGATTATTTTCCGGTGTTGAAGAGATTTGATTTGCAGGGTGTGAAGAGACATGTTAAGGTTTCTTATGATAGATTGCATGAGATTTTTGATCGTATGATTAGAAAACGTGTTGAGGATAGAGAGAGTTCGAATGACGGTGGCGGTGATGCGCGTGCAGGTGATTTTCTGGATGTGTTGCTTGATCATTGTCAAGAAGATGAAGGCTCTGTTTTTAGTGTTGAAAGCATCAAGCCGTTGATTCTGGATTTATTCATAGCTGGAAGTGACACATCAGGATCAACAACAGAATGGGCAATGGCAGAACTTCTCCACAATCCAAAAATAATGAAAAAAGCAACAAACGAAGTGACTCAAATAATCGGAAGATCCAACCAAGTCAAAGAATCTGACATTCCATATCTTCCTTACATCCAATCAATAGTCAAAGAAACACTTCGCCTTCATCCACCAGTTCCACTTCTCTTACCTTACATTGCATCAAACGATGTCGAAGTCAACGGTTACACAATTCACAAAGGAAACCAAGTTTTGATTAACGCTTGGTCTATTGGAAGAAACCCTGAGTTTTGGGATGATCCATTGGTTTTTAAGCCAGAGAGGTTTATTGATTCTAGTGTTGATTTTAAAGGTAGAGATTTTGAGTATTTACCTTTTGGTGCTGGGAGAAGAATTTGTCCTGGGATTCCTCTTGCTAATAGGATGATTGTTTTAATGTTGGCTGTTTTGTTGCATTCTTTTGAATGGGAGCTGCCTCAAGGTGTTGGTCCTGAAATGCTTGATATGAGGGAGCAATATGGAATCACGTTGAAGAAGCTTGTTCCTCTTTCTGCTGTTCCAATTTCTGTAGTTGTATGA 1500 0.44 MEIHILLLFATLSFIIIRFFRNHKKNKPPGPTGLPITGNLHQLGPQPHSSLSSLSKIYGPIMSLRFGSIDVTVASSPTTAQEILQKNDESFANRPIPESVAAQPNVNDTLAWAPANPRWRNRRRICTTQIFTSQRLDLLQHLRHRKVQELVQHLHKKAAERTTVDIGELAFATMLNLVSNTVFSEDIVDSEFESAGEFKELVWRIMEDAGKVNVCDYFPVLKRFDLQGVKRHVKVSYDRLHEIFDRMIRKRVEDRESSNDGGGDARAGDFLDVLLDHCQEDEGSVFSVESIKPLILDLFIAGSDTSGSTTEWAMAELLHNPKIMKKATNEVTQIIGRSNQVKESDIPYLPYIQSIVKETLRLHPPVPLLLPYIASNDVEVNGYTIHKGNQVLINAWSIGRNPEFWDDPLVFKPERFIDSSVDFKGRDFEYLPFGAGRRICPGIPLANRMIVLMLAVLLHSFEWELPQGVGPEMLDMREQYGITLKKLVPLSAVPISVVV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02704 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vifa3g02704 499 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 Gene3D Cytochrome P450 16 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 CDD CYP76-like 55 494 - -
Vifa3g02704 499 SUPERFAMILY Cytochrome P450 19 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 FunFam Cytochrome P450 76C4 20 493 - -
Vifa3g02704 499 Pfam Cytochrome P450 28 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02704 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02704 Vifa-Chr3 750295788 750302067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02704 3 495 Cytochrome P450 AT2G45550 43.086 1.39e-147 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02704 - - vra:106769993 715.687