Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02690 ATGGAGCCTCTCTCTTCCACCAAACAAATTAATAATAATAACAATCTCGCCAAGCCTTCTTCTCTCCATGTCGAAACACAACCTCTTGAACCAAGTCCCCTCCGTAAAATCATGGTGGTTGCATCCATCGCAGCCGGTGTTCAATTCGGCTGGGCCCTACAACTATCTCTTTTAACTCCCTACGTCCAGCTCCTCGGTATCCATCACACCTGGGCCGCTTACATTTGGCTCTGCGGCCCAATTTCCGGTATGCTTGTCCAGCCTATAGTCGGTTACCACAGCGACCGTTGCACTTCCCGCTTTGGTCGTCGTCGTCCGTTTATTGCTGCAGGCTCAATCGCAGTCGCTATCGCCGTCTTCCTAATCGGCTACGCCGCTGATCTTGGTCATTCCTTCGGCGACAGCCTCGACCAAAAAGTCCGTCCCCGAGCAATTGGAATCTTCGTCGTTGGATTCTGGATTCTCGACGTCGCTAACAATATGCTTCAGGGACCCTGCCGTGCACTTCTCGGTGACCTCTGCGCCGGTAACCAACGCAAAACGAGAAACGCTAACGCGTTTTTCTCCTTCTTCATGGCGGTTGGTAACGTCCTCGGCTACGCCGCCGTTTTAGCCACTTCCGCACTGATCTACGTGAAGGAAACTGCACTCACCCCGGAGAAAACCGTTGTGACGACTGAAGACGGTGGTTCAAGCGGTGGCATGCCTTGTTTTGGGCAGTTATCCGGTGCTTTCAAGGAACTAAAGAGACCCATGTGGATCTTATTATTGGTGACGTGTCTCAACTGGATTGCGTGGTTTCCTTTCCTCTTGTTTGATACTGATTGGATGGGGAAAGAGGTTTATGGAGGAACGGTTGGGGAAGGTCATGCGTATGATATGGGTGTGCGCGAGGGTGCTTTAGGACTCATGTTAAACTCAGTCGTTTTGGGTGCCACGTCACTGGGTGTTGATATCTTGGCGCGTGGAGTTGGGGGCGTCAAGAGGTTGTGGGGAATCGTTAACTTCTTGCTCGCAATTTGTTTGGGTTTAACCGTTTTGGTTACTAAATTAGCCCAACATTCGCGACAATACGCCCCCGGTACCGGTGCTCTCGGAGACCCTCTTCCACCTTCCGAAGGTATCAAGGCCGGCGCGTTAACTCTCTTCTCCGTTCTCGGAGTCCCACTCGCGATTACTTACAGTATACCCTTTGCTTTAGCATCTATATTCTCCAGCACCTCAGGGGCAGGCCAAGGGTTATCACTAGGAGTTCTTAATCTTGCAATTGTCATACCACAGATGTTTGTCTCTGTTTTGAGTGGACCATGGGATGCTCTATTTGGAGGCGGTAACTTGCCGGCGTTTGTGGTGGGTGCGGTGGCGGCTCTGGCGAGTGGCATACTATCCATAATCTTACTGCCATCTCCACCACCAGATATGGCCAAGTCTGTATCAGCTACTGGAGGAGGCTTTCATTAA 1461 0.5127 MEPLSSTKQINNNNNLAKPSSLHVETQPLEPSPLRKIMVVASIAAGVQFGWALQLSLLTPYVQLLGIHHTWAAYIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGSIAVAIAVFLIGYAADLGHSFGDSLDQKVRPRAIGIFVVGFWILDVANNMLQGPCRALLGDLCAGNQRKTRNANAFFSFFMAVGNVLGYAAVLATSALIYVKETALTPEKTVVTTEDGGSSGGMPCFGQLSGAFKELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGTVGEGHAYDMGVREGALGLMLNSVVLGATSLGVDILARGVGGVKRLWGIVNFLLAICLGLTVLVTKLAQHSRQYAPGTGALGDPLPPSEGIKAGALTLFSVLGVPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMFVSVLSGPWDALFGGGNLPAFVVGAVAALASGILSIILLPSPPPDMAKSVSATGGGFH 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02690 486 Pfam MFS/sugar transport protein 45 220 - -
Vifa3g02690 486 SUPERFAMILY MFS general substrate transporter 36 472 IPR036259 -
Vifa3g02690 486 CDD MFS_SLC45_SUC 37 462 - -
Vifa3g02690 486 Gene3D MFS general substrate transporter like domains 34 217 IPR036259 -
Vifa3g02690 486 PANTHER SUGAR TRANSPORTER 32 202 - -
Vifa3g02690 486 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02690 Vifa-Chr3 741504111 741506688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02690 20 486 Sucrose Transporter Gene Family AT1G22710 62.891 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02690 K15378 - gmx:547679 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04537 1 708170636 708174124 Vifa3g02690 3 741504111 741506688 PCT