Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02686 ATGGAGTTGGAAGGAAACTCTGATAACGATGGCACCCGCGTCAACTTATCAAATCTTGCACCGGTTGCACCGGATCAAACCGGAGAAGGTTTACCTTACGCACCGGTAAACTTCCCTAATCCCGGCGACATTTGGCGGTGGAAAGCCGGCAAGAGAATTTCGTCTAACGGTAACTATCGGGACCGGTGGCTTTATCTTCCTCGTCGTCTTGCTGCCTCTTACCGCGGCGGTGGATTTCCAAGCAAGCTTGCGGCTGAACGCTACGTCAAAGAATCGTTCCCTCATGTTAATATTGCTGATTTCTTCGCTTCCTTCACCTGGAGTATTCCTTCTGGTCTTCCTGGCAACATGAATCCTGTAGCTGATGGACTTCTTCATCGTCTTCATCGGTTAGAGTTAAAAGAGCAGACAGAATCTGATTTCGAAATTGGTGGATGCAAAGCTGGGAATAAGGCGTGCAGCAGTTTGATTTTGGAAGAAGAAAAAGAAAACTCACCAGTCACACCATGTGATATCTGTTGCGTTGAACCTAAATTTTGCCGGGAATGTTGCTGCATTCTCTGTTACAAAAGAGTTGATTCAGCTTATGGTAGCTATAGTTACATCATGTGCAAAGTAAAACTAGGCGATAATATTTGTGGCCATGTGTGTCATCTGGAATGCGCTCTTCGATCTTATTCGGCTGGCACTGTTGGAGGAACAATTGGATTGGATGCTGAGTATTTTTGTTGGCGCTGTGATGGGAGGACTGAACTGATTTCTCATGCAGATAAGCTTCTACAGACATGTGAAGCTATTGATACAGATGATGATGTTAAGGAAAAAATTCTAAAGCTTGGTATTTGCCTCCTGCATGGTTCAGAAAAAGTCGCTGCAAAGGAGCTTCTGAGCCGTATTACATTGGCCGTGTCAAAGCTTAAAAATGGGACTAATACTGAAGATATCCTGAACGATGACAATCATACAGCTAATTCTTCAGGTTCTTCAGGTAACGGCAATGCTGCAATGGATACTACAGACGATGAAGGTCCTTCTAAGCATCTAAATGCTCAAAAAGGAACACAATCTTTTCGTTATCAATCCGAGTTATTAAAGCTAGATGCTGAGTTTGATAAGGCTATGGAGGATCTTGAAAAATCCCAGAAGTATGAATATAAGCTGGCAGAGGAAAGTCTTCATACGCATAAGAAATATTTACTAAATATTTCACAGCAACTGGATAAAGAGAAATCCGAGTTAGCAAGCGAATCCGACACATCTTGTTCGAGTGTCTTGCTTCAAACTGTCGAGAAAAGAAATGAACAGCTAAGGCAGGAACTGAAAAAGTTTGAAGAAATGAAGAAGGTAGCTAATGGTTTTGGCAGCACATCCAAAGAAATTTTAGAAATGCACTTTGGCTTGTAA 1404 0.4245 MELEGNSDNDGTRVNLSNLAPVAPDQTGEGLPYAPVNFPNPGDIWRWKAGKRISSNGNYRDRWLYLPRRLAASYRGGGFPSKLAAERYVKESFPHVNIADFFASFTWSIPSGLPGNMNPVADGLLHRLHRLELKEQTESDFEIGGCKAGNKACSSLILEEEKENSPVTPCDICCVEPKFCRECCCILCYKRVDSAYGSYSYIMCKVKLGDNICGHVCHLECALRSYSAGTVGGTIGLDAEYFCWRCDGRTELISHADKLLQTCEAIDTDDDVKEKILKLGICLLHGSEKVAAKELLSRITLAVSKLKNGTNTEDILNDDNHTANSSGSSGNGNAAMDTTDDEGPSKHLNAQKGTQSFRYQSELLKLDAEFDKAMEDLEKSQKYEYKLAEESLHTHKKYLLNISQQLDKEKSELASESDTSCSSVLLQTVEKRNEQLRQELKKFEEMKKVANGFGSTSKEILEMHFGL 467
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02686 467 MobiDBLite consensus disorder prediction 1 21 - -
Vifa3g02686 467 MobiDBLite consensus disorder prediction 312 338 - -
Vifa3g02686 467 MobiDBLite consensus disorder prediction 312 354 - -
Vifa3g02686 467 Pfam PHD - plant homeodomain finger protein 149 280 IPR032881 -
Vifa3g02686 467 PANTHER ADAPTER PROTEIN, PUTATIVE-RELATED 15 467 - -
Vifa3g02686 467 Coils Coil 426 446 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa3g02686 Vifa-Chr3 740725362 740727496 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02686 176 308 PHD Gene Family AT3G24440 27.007 4.31e-07 50.4