Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02665 ATGAAACCTGATACGAATTGCAGTTGGCCGGAGAAGTGGAGCGCCGTTGACCGCCGTAGAAGCTCTGGTTTAGGGTTTTTTCGTGAAGAAAATCTGACTGAGAATAGAAAAGTTATTGAAAATGCACCACCAATTCCAGGTATTCACCATGTTGGAGGAGATATGTTTCAAAGTGTTCCACAAGGTGATGCCATCATACTAAAAGCTGTATGTCATAATTGGTCTGATCATAAATGCATTCAATTTTTAACCATTTGTCACAAAGCATTGTCACCAAATGGGAAAGTCATTCTTGTGGAATTCATATTGCCAGAACAACCAACATCAACTCAAGAATCAAAACTTGTTTCAACTCTTGACAATCTCATGTTTATCACTGTTGGTGGAAGGGAAAGAACTGAGAAACAATATCAGAATTTGGGAAAACTCTCTGGATTTTCCAAATTCCATGTTGCTTGCCGTGCTTTCTCTTGTTTAGGAGTCATTGAACTTTACAAATGA 501 0.3852 MKPDTNCSWPEKWSAVDRRRSSGLGFFREENLTENRKVIENAPPIPGIHHVGGDMFQSVPQGDAIILKAVCHNWSDHKCIQFLTICHKALSPNGKVILVEFILPEQPTSTQESKLVSTLDNLMFITVGGRERTEKQYQNLGKLSGFSKFHVACRAFSCLGVIELYK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02665 166 Gene3D Vaccinia Virus protein VP39 37 155 IPR029063 -
Vifa3g02665 166 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 38 163 IPR029063 -
Vifa3g02665 166 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 166 IPR016461 GO:0008168
Vifa3g02665 166 CDD AdoMet_MTases 29 103 - -
Vifa3g02665 166 PANTHER O-METHYLTRANSFERASE 37 149 IPR016461 GO:0008168
Vifa3g02665 166 Pfam O-methyltransferase domain 37 147 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02665 Vifa-Chr3 732939586 732940385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02665 38 166 Monolignol Biosynthesis Gene Families AT5G54160 53.077 1.27e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02665 - - ag:AAB48059 225.713