Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02661 ATGGGCTCAACCAATTACTCAACTACAGTTGATATATGGTCTATGGGTTGCATATTTGCTCACATCATTAAGCGTCGACCTCTCTTCAATGATATAGACACGCATAGGGTATTGGCTGAGATATTTTGTTTGTTTGGTATGCCAATTGAAGAAACTTGGTTGTGTCCAAAGGACCTAGCTGAAGAGTTCCCAACACTCGGACCTGCTGGTCTTCATCTTCTTTCGCTGATATGGTTTCATTCCTTATCAAGTGTGGTGACTGGAATACTGGTGGTGGTTGTCATTCGAACCGACATGCATTTCAGTACCCGGCAAGACTGTAGTCATTGGTGCCTCCCTGGTGTTCCCGATTCATGGAACGAGATTCTTTATTCTCTATTTCTCAAGAAGACTTTTTTTGGATCACAATTCAACCAAAATTTATAA 426 0.4155 MGSTNYSTTVDIWSMGCIFAHIIKRRPLFNDIDTHRVLAEIFCLFGMPIEETWLCPKDLAEEFPTLGPAGLHLLSLIWFHSLSSVVTGILVVVVIRTDMHFSTRQDCSHWCLPGVPDSWNEILYSLFLKKTFFGSQFNQNL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02661 141 SUPERFAMILY Protein kinase-like (PK-like) 2 78 IPR011009 -
Vifa3g02661 141 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 102 125 IPR026057 GO:0016740
Vifa3g02661 141 Gene3D Transferase(Phosphotransferase) domain 1 1 83 - -
Vifa3g02661 141 PANTHER CELL DIVISION PROTEIN KINASE 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02661 Vifa-Chr3 732823548 732824385 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02661 1 88 Core Cell Cycle Gene Families AT2G38620 36.275 1.84e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02661 - K02206 psat:127128144 122.094