Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02526 ATGAAGGTCAAGGTTTTCAGAAATTGTTGGCTAAGAGTTAAGTTTCTCAAATTTCCAATTGGCATGTGGGTTACATCACAACATAAGTCACACTCACACATACCAAAAGATGTTCCAAAAGGACACATAGTTGTCTATGTGGGTGAGGATTGCAAGAGATTTGTCATCAAAGTGAGCACACTCAAATATCCACCATTCAAGGCTTTGTTGGATCTTGCAGAGGATGTGTTTGGATTCACCAATGGTTCTAAACTTGTCATTCCTTGCAATGAAAACATTTTCCTTAACATTATTCATAATATTGGTGGTCCTGTCTAA 318 0.3742 MKVKVFRNCWLRVKFLKFPIGMWVTSQHKSHSHIPKDVPKGHIVVYVGEDCKRFVIKVSTLKYPPFKALLDLAEDVFGFTNGSKLVIPCNENIFLNIIHNIGGPV 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02526 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 96 IPR003676 GO:0009733
Vifa3g02526 105 Pfam Auxin responsive protein 27 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02526 Vifa-Chr3 677240972 677241289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02526 22 98 Calmodulin-binding Proteins AT4G34750 40.506 3.18e-16 67.8