Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02518 ATGGACATCACAATTACATCAAAAGAAATAATAAAACCATCATTTCCCACACCAAATGAACACAAACTCTTAAAACTATGTCTCTTTGATCAACTTCAATTAGTAACATATTTACCAATGGTTATGTTTTACCCTAAAAAAGAAAGCCTAATTGAAATCTCCCATTTTATTACTCAATTAAAAAAATCACTTTCTGAAACACTAACAATTTTCTACCCTATAGCTGGAAGAAGAAAGAATCACACTTTCATCACATGTAATGATGAAGGTGCTATTTACTTGGAAGCCAAGGTAAACCAAACCATGGTTGAGTTTCTCACACCACCTAAGCTAGAATTTCTAAACAAATTGCTTCCATGTGAGCCTAATAAAATGCATCAAAAAATTGGAGAAGAAGAAGATTTACCACAAGTACTTGTTCAAGTTAACATATTCAAGTGTGGTGGAATAGCTATAGGTACTTGTAATCTCCATACCCTCCTAGACGGTTGTTCCGGCAGCCTCTTTCAAACTACATGGGCGGCCATTTGTCGTGGCCGCCCTAGCAACGAATTGCCTCGTCCCGATTTCTTTTCCGCTTCTTCCTTCTTTCCACCAAATGATAATTTAATTTTGCATGATCATGTTGGTGAAAATGATAATGAGGTATTAGATGTTCAAAAGAAATGTAGCACAAGAAGATTTGTGTTTGGTTTAGAATCGATCAACGCTCTACGAGATAAAGCGAAAGACGACGATTATAATGATAATGATAATGAAAGATCTAAGTTTCCTACAAGATATGAAGTATTAGCTGCTTTTATTTGGAAACATATGACACTTGCATGTAAAAAGGAGGGTGGTGTAGATAGCAAAAGACCAGCATTGGCTATACATATTGTGGACATGAGGAGAAGGATGGGCGAGCCATTTTCTAAATACACTATAGGCAACATTTTGTGGCCAGTGATGGTGTTTTGTGAAGAAGTTAATGAAGAAATTGATATAAAATATTTGGTTAGAATTTGTAAAGAGAAATTTGGGAAGGTTTCAAGGGAATTGTTTTTAAGAGTGAAGAATGATACAAGTATGTTAGGGAGCAATGAATGTGTGGATTTGCCACAAGGTGTTGAGACAAAGTGTCCAATTCCAGTGGTTTTGACAAGTTGGTGTGGTTTGAATTTCAGTGAGCTTGATTTTGGTTGGGGGAAGCCTTATTGGGTTGGTGTTAGAGGTGGTGATCAAGAAACACTTCCTAATGTAGCTGTTATTATGGAAACAGATGAAGGAATGGAAGCTTGGTTGACAATGGAAATGGAACATATAGGTAACTTGGAAAATGATATGGAGTTTCTTAAATTAGCTTTGTCTAATCCTAGTGTTTCAAACATATAG 1374 0.3595 MDITITSKEIIKPSFPTPNEHKLLKLCLFDQLQLVTYLPMVMFYPKKESLIEISHFITQLKKSLSETLTIFYPIAGRRKNHTFITCNDEGAIYLEAKVNQTMVEFLTPPKLEFLNKLLPCEPNKMHQKIGEEEDLPQVLVQVNIFKCGGIAIGTCNLHTLLDGCSGSLFQTTWAAICRGRPSNELPRPDFFSASSFFPPNDNLILHDHVGENDNEVLDVQKKCSTRRFVFGLESINALRDKAKDDDYNDNDNERSKFPTRYEVLAAFIWKHMTLACKKEGGVDSKRPALAIHIVDMRRRMGEPFSKYTIGNILWPVMVFCEEVNEEIDIKYLVRICKEKFGKVSRELFLRVKNDTSMLGSNECVDLPQGVETKCPIPVVLTSWCGLNFSELDFGWGKPYWVGVRGGDQETLPNVAVIMETDEGMEAWLTMEMEHIGNLENDMEFLKLALSNPSVSNI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02518 457 Gene3D - 1 208 IPR023213 -
Vifa3g02518 457 Gene3D - 220 448 IPR023213 -
Vifa3g02518 457 Pfam Transferase family 1 444 - -
Vifa3g02518 457 PANTHER F21J9.9 4 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02518 Vifa-Chr3 675805552 675806925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02518 1 439 Monolignol Biosynthesis Gene Families AT5G48930 24.947 4.72e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02518 - K13065 gmx:102668997 685.256