Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02511 ATGGCCAAGAAAACCCTCTCTTCTTCTCAAGCTTCATCTCAAAACTCACATGCACACAAAACCCTTCCAGATCCAACACAAACAACACTCTCATCTCAATCTCAACCACTACAAATCCAACCACTTCCCACTTCAAACTCTCTCCGCCCTGACCGTTCCAAGAAACCCACACCCCTCACCGCCTCTGAATCCTCCAAAAGGACCCAGAGAATATGCTTCACTCCCGACAATGTGTTGCTCATTCTTAAATCCCTTTCAGATTTCAAATCCAAAACTGGAAAAGACCCAGTCAAACACCTCACTGATTTTCATGATTCATTGAAAAGTTCTCTCAAGATCAAAACTACAAAAAGGAAACTCGGAGAGAAGATTCGGGTGTTGAGGATCAAGTTCGAGAAGCCATGTCAATATAATCAAGTTGAAGGAAAAGAAAAATCACCCAAGATGGACAATGCTACTAAGAAACTGATGCTGGAAGAACCACCCAAGAAGGAAAATGCTACTAAGAAACCATCAATATCGAAGAAATCGAGACATGCTGCTTAG 546 0.4212 MAKKTLSSSQASSQNSHAHKTLPDPTQTTLSSQSQPLQIQPLPTSNSLRPDRSKKPTPLTASESSKRTQRICFTPDNVLLILKSLSDFKSKTGKDPVKHLTDFHDSLKSSLKIKTTKRKLGEKIRVLRIKFEKPCQYNQVEGKEKSPKMDNATKKLMLEEPPKKENATKKPSISKKSRHAA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02511 181 Pfam Protein of unknown function, DUF573 73 150 IPR007592 GO:0006355
Vifa3g02511 181 MobiDBLite consensus disorder prediction 139 172 - -
Vifa3g02511 181 MobiDBLite consensus disorder prediction 1 68 - -
Vifa3g02511 181 MobiDBLite consensus disorder prediction 139 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02511 Vifa-Chr3 673932445 673933068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02511 69 131 GeBP Transcription Factor Family AT1G61730 36.508 1.21e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vifa3g02511 DUF573 9.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02511 - K19414 psat:127092376 182.57