Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02510 ATGGCCAAGAAAACCCTCTCTTCTTCTCAAGCTTCATCTCAAAACTCACATGCACACAAAACCCTTCCAGATCCAACACAATCACCACCCATTCCTTCAAAACCCTCATCACTCTCTTCTCAATCCCACACACATCAAACCCAACCACTTTCCACTTCAAACTCTCCCCGCCCTAACCGTTCAAAGAAGCCCACACCCGTCGCCGCCGCCGCTGCCGCTGCCGCCGCCGCCGAATCCTCCAAAAGGTCCCAGAGAGTCTGCTTCACTCCCGACGATGTGTTGCTCATTCTTAAATCTCTTTCAGATTTCAAATCCAAAACTGGAAAAGACCCGGTCAAACACATCACTGATTTTCATGATTCATTGAAGAGTGCTCTCAAGATCAAAACTACTGAAAGGAAACTCAGAGAGAAGATTCGGGTGTTGAGGATCAAATTCCAGAAGCAATGTGAAACCGAAGAAAAATACATTTCTTTTTCAAATACTTTTGAAGAGCAAGTTTTTGAGCTTTCTAAGGAATTTTGGGGTCAAGATAATCAAATTGAAGAACAAGAAAAATCACCTGAGAAGGACAATGCTGCTAAGAAACTGCTGCTGCTGGAAGAACCACCCAAGAAGGAAAATGCTGCTATAAAACCATCAACATTGAAGAATTCGGTCCAGGAAGAACCACCCAAGAAGGCTAATAAACCATTAGCATCGAAGAAGAAACCGATCCAGGAAGAGCTATCATCTGTTGTTGACAGTGATAAAACGGGTCGTGTTAGTTTGAGTGAAATGTTTCGTTTTGGGGAAATGTGTATGGATGTGAATGTGCTCAAGAGGGGGATGGAGTTGATTGGGGAATCTCAGAGGGAAGAATTGGAAACAAGGTGGAAGAAGTTGAAAGTTCAAGAGGCGGAAGTGTTTCTGAAGCGTGCGGAGTTGGCTGTAGATCAAGGTCGATTGATTTTGAAGGAATTAAAAAGATCGTCTTAG 978 0.4366 MAKKTLSSSQASSQNSHAHKTLPDPTQSPPIPSKPSSLSSQSHTHQTQPLSTSNSPRPNRSKKPTPVAAAAAAAAAAESSKRSQRVCFTPDDVLLILKSLSDFKSKTGKDPVKHITDFHDSLKSALKIKTTERKLREKIRVLRIKFQKQCETEEKYISFSNTFEEQVFELSKEFWGQDNQIEEQEKSPEKDNAAKKLLLLEEPPKKENAAIKPSTLKNSVQEEPPKKANKPLASKKKPIQEELSSVVDSDKTGRVSLSEMFRFGEMCMDVNVLKRGMELIGESQREELETRWKKLKVQEAEVFLKRAELAVDQGRLILKELKRSS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02510 325 MobiDBLite consensus disorder prediction 1 84 - -
Vifa3g02510 325 ProSitePatterns EF-hand calcium-binding domain. 248 260 IPR018247 -
Vifa3g02510 325 Pfam Protein of unknown function, DUF573 88 176 IPR007592 GO:0006355
Vifa3g02510 325 MobiDBLite consensus disorder prediction 1 23 - -
Vifa3g02510 325 MobiDBLite consensus disorder prediction 202 245 - -
Vifa3g02510 325 PANTHER BNAANNG10740D PROTEIN-RELATED 20 319 IPR007592 GO:0006355
Vifa3g02510 325 MobiDBLite consensus disorder prediction 228 245 - -
Vifa3g02510 325 MobiDBLite consensus disorder prediction 33 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02510 Vifa-Chr3 673761440 673762417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02510 25 319 GeBP Transcription Factor Family AT4G25210 23.077 4.45e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vifa3g02510 DUF573 2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02510 - - psat:127092376 389.808