Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02445 ATGGCTGAACAACTTGTAATCAAGCTTCTCCATTTACTACTACTACCACTTCTTTTCACTTTAATAACAACAGATTTAGTAGAAGGGACTAAGAAAACATATGGGGTATATGAAAACAACAATGTAAAATTGTTTGTATTCGGAGACTCCTACGTAGATACAGGAAATTTCTTGAACTCATCATCGTATAAACCTCCTTATGGAATGACATATCCTGGGAAACCTGCTGGAAGATTCTCTGATGGTCGTGTTCTAACAGATTACATTGCTTCGTTTCTGAAAATTGAAACCCCAACACCATATTCATTAAGAAATTCCTCAGCTCTAGAAAATGGAATAAACTTTGCTTATGGAGGGACAGGTGTTTTTCCAACTCTAGTCGATGGACCAAACATGACTGTTCAAATCGATTCATTTGAGAAGCTAATCAAACAAAAGGTTTATACCAAACAAGACCTTCAATTCTCTATTGCGCTTGTAAGCGCTTCTGGAAATGATTACATTACCTTTATAAAGAATAGCAGCATCACGGAGATAAAATCCTTCACTTCCTTGCTTATCAAGCAACTATTAATAAATGTTCAACGCATCCATAACTTAGGAATAAATAAAATAGCAATTGGGTTATTGGAACCTATTGGGTGTATGCCTCCAATAACTCAACTAACTTTTCATCTCAGTTGTGTTGATGTTCTAAATTTGGTATCTGAAAATCACAACCAAGTTTTGCTCCAAAATTTGCTACAACTTAATCAACAACTTGGAAAATCGGTTTTCGTTACACTAGACCTTTACAACGCTTTCCTCTCTACGATTACAACGATGCAAAAAAATCGCAAAGAAAATTCAACACTAATGAATCCATTAGAAATGTGTTGTAAGGGAGAGAGCTTGAAGGTTTCTTGTGGAAGTGTGGATGATAATGGGAATAAGAAATACAGTTTGTGTGAGAATCCAGAGCTTTCATTCTTTTGGGATAGAGTTCACCCTTCTCAAAATGGTTGGAATGCTGTCTACAAACAATTGCAATTATCTCTTGGTCAACTTATTGATAGAAACTAA 1062 0.354 MAEQLVIKLLHLLLLPLLFTLITTDLVEGTKKTYGVYENNNVKLFVFGDSYVDTGNFLNSSSYKPPYGMTYPGKPAGRFSDGRVLTDYIASFLKIETPTPYSLRNSSALENGINFAYGGTGVFPTLVDGPNMTVQIDSFEKLIKQKVYTKQDLQFSIALVSASGNDYITFIKNSSITEIKSFTSLLIKQLLINVQRIHNLGINKIAIGLLEPIGCMPPITQLTFHLSCVDVLNLVSENHNQVLLQNLLQLNQQLGKSVFVTLDLYNAFLSTITTMQKNRKENSTLMNPLEMCCKGESLKVSCGSVDDNGNKKYSLCENPELSFFWDRVHPSQNGWNAVYKQLQLSLGQLIDRN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02445 353 PANTHER OSJNBB0059K02.9 PROTEIN 22 350 - -
Vifa3g02445 353 Gene3D SGNH hydrolase 38 347 IPR036514 -
Vifa3g02445 353 Pfam GDSL-like Lipase/Acylhydrolase 44 340 IPR001087 GO:0016788
Vifa3g02445 353 SUPERFAMILY SGNH hydrolase 40 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02445 Vifa-Chr3 618078239 618100921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02445 21 342 Pollen Coat Proteome AT1G75910 26.257 1.00e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02445 - - gmx:100790363 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02445 3 618078239 618100921 Vifa3g02445 3 618078239 618100921 ECH