Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02444 ATGATTGTTTGGTTTTCTCATGTATGCATATATGTTTACTACACAGCCTCATTTCTGAAAATTGAAACCCCTACACCATACTCGTTAAAGAATTCCTCAAATCTACAATATGGAATCAACTTTGCTCATGGAGGTGTGGGAATCTTCGAAACATTGACTAAAGGACCAAACATGACTGTTCAAATCGACTCACTCGAGAATCTAATCAAACAGAATGTTTATACCAAACAAGACCTCGAATCTTCTGTTGCTCTTGTAGCCGTTTCTGGAAACGATTACACTGCATTTTTAGCAAAAATAAAAGAGATAAAATCATTCACTGAAACACTTATCAAGCAAATATCGATAAACGTTCAACGCATTCACAATTTGGGAGTAAACAAAATAGCAATTGGATTATTGGAACCTATTGGATGTTTGCCTCAAATAACTGTGGTAACTTTTCATCTTAGTTGTGTTGATCCTTTAAATTTGGTAGCCCAAAATCACAATGAAGTATTGCTTCAAACTGTAAAACAACTTAACCAACAAGTTGGAAAATCGGTTTTCGTTACACTAGACCTCTACAATGCTTTCCTATCCACAATTGACATGATGCAGGAAAATCAAGAGGATGACTCAAAGCTGCTGAATCCATTATTAAAACCTTGCTGTAATGGAGAAGGTTTTAAAAACTCTTGTGGAGTTGTGGATGATAATGGAGAAAAGAGATATAGTTTATGTGATAAACCAGACGCTTCATTCTTTTGGGACTATGTTCATCCTTCTCAAAATGGTTGGAATTCTGTTTACCAACAGTTGCAATCTTCTCTCGGTCAACTTATTGAAAAAAGTTAA 837 0.3513 MIVWFSHVCIYVYYTASFLKIETPTPYSLKNSSNLQYGINFAHGGVGIFETLTKGPNMTVQIDSLENLIKQNVYTKQDLESSVALVAVSGNDYTAFLAKIKEIKSFTETLIKQISINVQRIHNLGVNKIAIGLLEPIGCLPQITVVTFHLSCVDPLNLVAQNHNEVLLQTVKQLNQQVGKSVFVTLDLYNAFLSTIDMMQENQEDDSKLLNPLLKPCCNGEGFKNSCGVVDDNGEKRYSLCDKPDASFFWDYVHPSQNGWNSVYQQLQSSLGQLIEKS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02444 278 SUPERFAMILY SGNH hydrolase 39 271 - -
Vifa3g02444 278 Gene3D SGNH hydrolase 5 273 IPR036514 -
Vifa3g02444 278 Pfam GDSL-like Lipase/Acylhydrolase 10 260 IPR001087 GO:0016788
Vifa3g02444 278 PANTHER OSJNBB0059K02.9 PROTEIN 5 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02444 Vifa-Chr3 618060775 618061840 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02444 24 267 Pollen Coat Proteome AT1G75910 23.774 5.21e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02444 - - gmx:100790884 338.191